Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limulus_20polyphemus_20[refseq_20GCF_5F000517525.1_202014-01-03] 286,793 sequences; 1,828,271,751 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq317 77.0 5e-12 seq2848 75.2 2e-11 seq264071 73.4 6e-11 >seq317 Length=708231 Score = 77.0 bits (84), Expect = 5e-12 Identities = 51/57 (89%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 58 AGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 |||| |||||||||||||| | |||||||| |||||||||||||||||||||||| Sbjct 423327 AGTGGTGCGAAGCTACCATCCGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 423383 >seq2848 Length=163508 Score = 75.2 bits (82), Expect = 2e-11 Identities = 47/51 (92%), Gaps = 0/51 (0%) Strand=Plus/Minus Query 64 GCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 |||||||||||||| | |||||||| |||||||||||||||||||||||| Sbjct 137299 GCGAAGCTACCATCCGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 137249 >seq264071 Length=224 Score = 73.4 bits (80), Expect = 6e-11 Identities = 46/50 (92%), Gaps = 0/50 (0%) Strand=Plus/Minus Query 65 CGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 ||||||||||||| | |||||||| |||||||||||||||||||||||| Sbjct 224 CGAAGCTACCATCCGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 816924010752