Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Linepithema_20humile_20[refseq_20GCF_5F000217595.1_202011-06-10] 3,030 sequences; 219,500,750 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq2587 98.7 5e-19 seq2217 98.7 5e-19 seq645 98.7 5e-19 seq2955 82.4 4e-14 >seq2587 Length=99143 Score = 98.7 bits (108), Expect = 5e-19 Identities = 63/69 (91%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||||| ||| |||| ||||||| ||||||| ||||||||||| Sbjct 26274 GGAAAAGAAACTAACCAGGATTTCCTTAGTAGCGGCGAGCGAACAGGAAAGAGCCCAGCA 26215 Query 61 CCGAATCCC 69 ||||||||| Sbjct 26214 CCGAATCCC 26206 >seq2217 Length=28776 Score = 98.7 bits (108), Expect = 5e-19 Identities = 63/69 (91%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||||| ||| |||| ||||||| ||||||| ||||||||||| Sbjct 2270 GGAAAAGAAACTAACCAGGATTTCCTTAGTAGCGGCGAGCGAACAGGAAAGAGCCCAGCA 2329 Query 61 CCGAATCCC 69 ||||||||| Sbjct 2330 CCGAATCCC 2338 >seq645 Length=1267 Score = 98.7 bits (108), Expect = 5e-19 Identities = 63/69 (91%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||||| ||| |||| ||||||| ||||||| ||||||||||| Sbjct 120 GGAAAAGAAACTAACCAGGATTTCCTTAGTAGCGGCGAGCGAACAGGAAAGAGCCCAGCA 179 Query 61 CCGAATCCC 69 ||||||||| Sbjct 180 CCGAATCCC 188 >seq2955 Length=1136371 Score = 82.4 bits (90), Expect = 4e-14 Identities = 59/68 (87%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||| ||||||||||| ||| |||| ||||||| ||||||| |||||||||| Sbjct 1131117 GGAAAAGAAATTAACCAGGATTTCCTTAGTAGCGGCGAGCGAACAGGAAAGAGCCCAGTA 1131176 Query 61 CCGAATCC 68 || ||||| Sbjct 1131177 CCAAATCC 1131184 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230393455200