Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Linepithema_20humile_20[refseq_20GCF_5F000217595.1_202011-06-10] 3,030 sequences; 219,500,750 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq2997 311 1e-82 seq2587 127 3e-27 >seq2997 Length=66827 Score = 311 bits (344), Expect = 1e-82 Identities = 241/284 (85%), Gaps = 6/284 (2%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| || | ||| |||||||||||||||||||||||||||||| Sbjct 31589 TACTGAGCAGGATTACTATCGCAATGACTAGTCATCAGTAGGGTAAAACTAACCTGTCTC 31648 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||| || | ||||||||| ||| |||||| || Sbjct 31649 ACGACGGTCTAAACCCAGCTCACGTTCCCTGTTGGCGGGTGAACATTCCGACGCTTGGCG 31708 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||||||||||| |||||||||||||||||||| ||||||||||||||| ||||||||| Sbjct 31709 AATTCTGCTTCGCAATGATAGGAAGAGCCGACATTGAAGGATCAAAAAGCGACGTCGCTA 31768 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 | |||||||||| ||||||||| ||||||||||||||||||||||||| ||||||| || Sbjct 31769 TAAACGCTTGGCCGCCACAAGCTAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTGCT 31828 Query 240 TCAAA---TTTCGAGGGACTAAAGGATCGATAGGCCACACTTTC 280 ||| || | | | | |||||||||||||||| ||||| Sbjct 31829 GAAAACTCTTACAA--GCCAAAAGGATCGATAGGCCGTGCTTTC 31870 >seq2587 Length=99143 Score = 127 bits (140), Expect = 3e-27 Identities = 100/118 (85%), Gaps = 4/118 (3%) Strand=Plus/Plus Query 165 AAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 224 ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 40222 AAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 40281 Query 225 CTGGCACCTCTAGCCTCAAA--TTTCGAGGGACTAAAGGATCGATAGGCCACACTTTC 280 ||| ||||||| || ||| ||| | | | |||||||||||||||| ||||| Sbjct 40282 CTGACACCTCTTGCTGAAAACTCTTCAA--GCCAAAAGGATCGATAGGCCGTGCTTTC 40337 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854374111680