Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Linepithema_20humile_20[refseq_20GCF_5F000217595.1_202011-06-10] 3,030 sequences; 219,500,750 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq2976 91.5 9e-17 seq2217 87.8 1e-15 seq2091 86.0 4e-15 >seq2976 Length=29344 Score = 91.5 bits (100), Expect = 9e-17 Identities = 75/86 (87%), Gaps = 4/86 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||||| |||| || ||||||||| ||||||||||| |||||||||| Sbjct 4476 TCCGAA-GACCTCACTAAATCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 4420 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| |||||| |||| Sbjct 4419 GGCAGGGACGTAAT-CAACGCGAGCT 4395 >seq2217 Length=28776 Score = 87.8 bits (96), Expect = 1e-15 Identities = 74/86 (86%), Gaps = 4/86 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||||| |||| || ||||||||| ||||||| ||| |||||||||| Sbjct 503 TCCGAA-GACCTCACTAAATCATT-CAATCGGTAGTA-GCGACGGACGGTGTGTACAAAG 447 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| |||||| |||| Sbjct 446 GGCAGGGACGTAAT-CAACGCGAGCT 422 >seq2091 Length=1041 Score = 86.0 bits (94), Expect = 4e-15 Identities = 75/87 (86%), Gaps = 5/87 (6%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCAC-TAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAA 97 |||||| | ||||| ||| |||| || ||||||||| ||||||||||| ||||||||| Sbjct 415 TCCGAA-GACCTCACCTAAATCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAA 471 Query 98 GGGCAGGGACGTAATACAACGCAAGCT 124 ||||||||||||||| |||||| |||| Sbjct 472 GGGCAGGGACGTAAT-CAACGCGAGCT 497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300791455400