Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Linepithema_20humile_20[refseq_20GCF_5F000217595.1_202011-06-10] 3,030 sequences; 219,500,750 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq657 87.8 2e-15 seq2997 86.0 7e-15 seq2587 73.4 5e-11 >seq657 Length=1008 Score = 87.8 bits (96), Expect = 2e-15 Identities = 85/106 (80%), Gaps = 5/106 (5%) Strand=Plus/Minus Query 9 GAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAAT-GTATTCGGG 67 |||||||||||||||| || | ||||||||| |||||||||||| | |||||| || Sbjct 717 GAAACCAACAAAATAGAACCG-AGGTCCTATTCCATTATTCCATGCACACAGTATTCAGG 659 Query 68 CGTA---AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 || | |||||||||| | ||||||||||| |||| ||||| || Sbjct 658 CGAAGGTAGCCTGCTTTAAGCACTCTAATTTGTTCAAAGTAAACGT 613 >seq2997 Length=66827 Score = 86.0 bits (94), Expect = 7e-15 Identities = 84/105 (80%), Gaps = 5/105 (5%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAAT-GTATTCGGGC 68 ||||||||||||||| || | ||||||||| |||||||||||| | |||||| ||| Sbjct 18902 AAACCAACAAAATAGAACCG-AGGTCCTATTCCATTATTCCATGCACACAGTATTCAGGC 18960 Query 69 GTA---AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 | | |||||||||| | ||||||||||| |||| ||||| || Sbjct 18961 GAAGGTAGCCTGCTTTAAGCACTCTAATTTGTTCAAAGTAAACGT 19005 >seq2587 Length=99143 Score = 73.4 bits (80), Expect = 5e-11 Identities = 80/102 (78%), Gaps = 6/102 (6%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGC-TAATGTATTCGGGC 68 ||||||||||||||| || | ||||||||| |||||||||||| | |||||| ||| Sbjct 28912 AAACCAACAAAATAGAATCG-AGGTCCTATTCCATTATTCCATGCACACAGTATTCAGGC 28970 Query 69 ---GTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | |||||||||| | ||||||||| | |||| ||||| Sbjct 28971 AAAGGTAGCCTGCTTTAAGCACTCTAATATGTTCAA-GTAAA 29011 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595182529020