Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Linepithema_20humile_20[refseq_20GCF_5F000217595.1_202011-06-10]
3,030 sequences; 219,500,750 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq2581 86.0 5e-12
>seq2581
Length=3237177
Score = 86.0 bits (94), Expect = 5e-12
Identities = 119/167 (71%), Gaps = 0/167 (0%)
Strand=Plus/Plus
Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGT 61263
||||| |||||||||||||| ||||| || || || || ||||| || ||| | ||| |
Sbjct 740492 CATGTTTTGGCGTTCTTTGCTGCTTCTGATGGAATTGTTAATGAAAACTTAATTGAAAGA 740551
Query 61264 TTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATG 61323
||| || || || || | | || || || ||||| || || ||||| || |||||
Sbjct 740552 TTCAGTCAAGAAGTAAAAATCGCAGAAGCACGCTGTTTTTATGGTTTCCAAATCGCCATA 740611
Query 61324 GAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACAT 61370
|| ||| | || || || ||||| | ||||| || || |||||
Sbjct 740612 GAAAATATTCATTCAGAAATGTATTCACTACTCATTGAAACTTACAT 740658
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397553318559200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |