Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Linepithema_20humile_20[refseq_20GCF_5F000217595.1_202011-06-10] 3,030 sequences; 219,500,750 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq2581 86.0 5e-12 >seq2581 Length=3237177 Score = 86.0 bits (94), Expect = 5e-12 Identities = 119/167 (71%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGT 61263 ||||| |||||||||||||| ||||| || || || || ||||| || ||| | ||| | Sbjct 740492 CATGTTTTGGCGTTCTTTGCTGCTTCTGATGGAATTGTTAATGAAAACTTAATTGAAAGA 740551 Query 61264 TTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATG 61323 ||| || || || || | | || || || ||||| || || ||||| || ||||| Sbjct 740552 TTCAGTCAAGAAGTAAAAATCGCAGAAGCACGCTGTTTTTATGGTTTCCAAATCGCCATA 740611 Query 61324 GAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACAT 61370 || ||| | || || || ||||| | ||||| || || ||||| Sbjct 740612 GAAAATATTCATTCAGAAATGTATTCACTACTCATTGAAACTTACAT 740658 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397553318559200