Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Linepithema_20humile_20[refseq_20GCF_5F000217595.1_202011-06-10] 3,030 sequences; 219,500,750 total letters Query= NC_033778.1 Length=111453 Score E Sequences producing significant alignments: (Bits) Value seq2939 84.2 2e-11 >seq2939 Length=1430158 Score = 84.2 bits (92), Expect = 2e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 26020 AGATTAATAACATTTGAAACATGGCCAAAAGCAATGATGCGAATTAAAGAACAACTTTCA 26079 |||||| ||||||||||||||||| | ||||||| || || ||||||| |||| || Sbjct 611376 AGATTACGTACATTTGAAACATGGCCTAGAGCAATGTCGCAAACTAAAGAAGAACTAGCA 611317 Query 26080 AATGCGGGttttttttATTCAGGAAATGGAGATAAAGTATTATGTTATCAATGTGGTGG 26138 | || ||||||| ||| |||||| || || || ||| ||||| || ||||| || Sbjct 611316 ACAGCTGGTTTTTATTACACAGGAAGCGGTGACCAAACATTGTGTTACCATTGTGGAGG 611258 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356511634207620