Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29] 31,049 sequences; 69,698,627 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq15607 484 2e-134 >seq15607 Length=2888 Score = 484 bits (536), Expect = 2e-134 Identities = 288/300 (96%), Gaps = 1/300 (0%) Strand=Plus/Minus Query 205 TGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGTT 264 ||||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||| Sbjct 865 TGATAGGGCAGAAATTTGAATGAACCATCGCCGGCGCAAGGCCGTGCGATTCGAGAAGTT 806 Query 265 ATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCCT 324 || ||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||| Sbjct 805 ATCATGAATCACCAGTGAGCCCCGAAGGGCATTGGTTTTTAATCTAATAAATACACCCCT 746 Query 325 TCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGT 384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 745 TCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGT 686 Query 385 AAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAG 444 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 685 AAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCGCTGTATA- 627 Query 445 ATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 626 ATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATAACTACTGGCAG 567 Score = 170 bits (188), Expect = 6e-40 Identities = 100/104 (96%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct 1413 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTCTCGTCACTACCT 1354 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTT 104 | ||||||||| |||||||||||||||||||||||||||||||| Sbjct 1353 CGCCGTGTCGGCATTGGGTAATTTGCGCGCCTGCTGCCTTCCTT 1310 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1509931035904