Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29]
31,049 sequences; 69,698,627 total letters
Query= NC_023503.1
Length=48800
Score E
Sequences producing significant alignments: (Bits) Value
seq3086 145 2e-30
>seq3086
Length=1379
Score = 145 bits (160), Expect = 2e-30
Identities = 266/386 (69%), Gaps = 8/386 (2%)
Strand=Plus/Plus
Query 2517 CAAATACCCAATCATCACTATCGAAGATGGTATGGACGAAAACGACTGGGACGGTTGGAA 2576
|||||| ||||| || |||| ||||||| ||| | ||| |||||| || ||||||||
Sbjct 196 CAAATATCCAATAATTTCTATAGAAGATGCAATGAATGAAGACGACTATGAAGGTTGGAA 255
Query 2577 ATCTCTTACTGAACGTCTTGGTGGTAAAGTTCAATTGGTTGGTGACGACTTCTTCGTAAC 2636
|| ||||||| | ||||| |||||||||||||||||| || || || || || ||
Sbjct 256 ATTACTTACTGTAAAACTTGGGAATAAAGTTCAATTGGTTGGAGATGATTTATTTGTTAC 315
Query 2637 TAACACTGCTTAC--CTTGAAAAAGG--TATTGCAGAACACGCTGCTAACTCAATCCTTA 2692
| | || || | | ||||| || | |||| | | || || | | || |
Sbjct 316 --AAATTGTAAACTAATAGGTAAAGGAATAGAGGAGAAAATG--GCAAATGCTGTACTAA 371
Query 2693 TCAAAGTTAACCAAATCGGTACTTTGACTGAAACTTTTGACGCTATCGAAATGGCGAAAG 2752
|||| ||||| || || || | || |||||||||| ||||| |||||||| |||
Sbjct 372 TCAAGCCAAACCAGATAGGAACACTTACGGAAACTTTTGCTGCTATTGAAATGGCAAAAT 431
Query 2753 AAGCTGGATACACAGCAGTAGTATCACACCGTTCAGGTGAAACTGAAGATTCAACAATCG 2812
| ||| |||| || | | ||||| || ||||||||||| ||||| |||| ||
Sbjct 432 TAAATGGCTACAGGGCTATTATTTCACATCGCTCAGGTGAAACAGAAGACACAACGATAT 491
Query 2813 CTGATATTGCAGTTGCAACTAACGCTGGTCAAATTAAGACAGGTTCATTGTCACGTACTG 2872
| | || ||||||| | || ||| ||||| ||||| || || |||| ||| |||
Sbjct 492 CCCACATATCAGTTGCGTCGAATTGTGGGCAAATAAAGACTGGCTCGCTGTCGCGTTCTG 551
Query 2873 ACCGTATTGCTAAATACAACCAATTG 2898
| | |||| || || || |||||
Sbjct 552 ATAGGCTTGCAAAGTATAATGAATTG 577
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 155980867569156
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |