Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29]
31,049 sequences; 69,698,627 total letters
Query= NC_031940.1
Length=77375
Score E
Sequences producing significant alignments: (Bits) Value
seq4088 140 2e-28
>seq4088
Length=5036
Score = 140 bits (154), Expect = 2e-28
Identities = 112/135 (83%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 64734 CACAACGATGAGAGCATTACCGGTGTCCGAATTGAACGGACCTTTTCTCTGCCCAACCCA 64793
||||| || || |||| ||||||||| ||||||||||| |||||||| || ||||||||
Sbjct 1686 CACAATGAAGAAAGCACTACCGGTGTTCGAATTGAACGAACCTTTTCCCTACCCAACCCC 1627
Query 64794 CCTCACTAAAGAGGTCTGTCTGGAATCGAACCAGCACTTATGCCTTGCTCGTCAATACTC 64853
| || | ||| | || |||||||| ||||||||| |||||||||| |||| ||| |||
Sbjct 1626 TCGCATTGAAGCGAGCTATCTGGAATTGAACCAGCATTTATGCCTTGATCGTTAATGCTC 1567
Query 64854 TCATCGTTGTGTGCC 64868
|| ||||||||||||
Sbjct 1566 TCTTCGTTGTGTGCC 1552
Score = 140 bits (154), Expect = 2e-28
Identities = 112/135 (83%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 25144 CACAACGATGAGAGCATTACCGGTGTCCGAATTGAACGGACCTTTTCTCTGCCCAACCCA 25203
||||| || || |||| ||||||||| ||||||||||| |||||||| || ||||||||
Sbjct 1686 CACAATGAAGAAAGCACTACCGGTGTTCGAATTGAACGAACCTTTTCCCTACCCAACCCC 1627
Query 25204 CCTCACTAAAGAGGTCTGTCTGGAATCGAACCAGCACTTATGCCTTGCTCGTCAATACTC 25263
| || | ||| | || |||||||| ||||||||| |||||||||| |||| ||| |||
Sbjct 1626 TCGCATTGAAGCGAGCTATCTGGAATTGAACCAGCATTTATGCCTTGATCGTTAATGCTC 1567
Query 25264 TCATCGTTGTGTGCC 25278
|| ||||||||||||
Sbjct 1566 TCTTCGTTGTGTGCC 1552
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 247381552986904
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |