Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq517028 178 2e-42 >seq517028 Length=6016 Score = 178 bits (196), Expect = 2e-42 Identities = 238/326 (73%), Gaps = 9/326 (3%) Strand=Plus/Minus Query 11 AGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGA-TTC 69 ||||| |||||||||| |||||| ||| || ||||||| || |||||| | | || Sbjct 2888 AGGGGAGTGAAATAGAACCTGAAACCGTATGCGTACAAGCAGTGGGAGCCCACTTTGTTG 2829 Query 70 GGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAG 129 |||||| |||| ||||||| |||||| | | ||| ||| | ||| ||||| |||| Sbjct 2828 GGTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTATTT-TCAGTGGCGAGCTTAAC 2770 Query 130 GGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCG 189 | | || || || || ||||||||| ||||| |||||| | ||| | ||| Sbjct 2769 CGAATAGGGG-----AGGCGTAGCGAAAGCGAGTCTTAATAGGGCGTCTAGTCGCTGGGA 2715 Query 190 CTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGA-T 248 ||||| ||||||| | |||||| ||| ||||||||||||| |||||| | ||| | Sbjct 2714 ATAGACCCGAAACCGGGCGATCTATCCATGAGCAGGTTGAAGGTTAGGTAACAC-TGACT 2656 Query 249 GGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAG 308 ||||||||||||| |||||||||| |||||||| | || | || ||||||| Sbjct 2655 GGAGGACCGAACCCACTTCCGTTGAAAAGGCAGGGGATGACTTGTGGATCGGAGTGAAAG 2596 Query 309 GCCAATCAAACTGGGAAATAGCTCGT 334 || |||||| || ||| |||||| || Sbjct 2595 GCTAATCAAGCTCGGAGATAGCTGGT 2570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 959205197824