Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq523060 210 3e-52 seq357611 185 1e-44 seq125476 165 1e-38 seq528127 129 9e-28 seq851035 125 1e-26 seq499640 125 1e-26 seq418993 114 2e-23 seq985986 113 7e-23 seq987970 111 2e-22 seq843596 107 3e-21 seq901600 100 4e-19 seq814768 93.3 6e-17 seq287184 89.7 8e-16 seq490715 82.4 1e-13 seq668085 78.8 1e-12 seq524183 78.8 1e-12 seq294324 78.8 1e-12 >seq523060 Length=1424 Score = 210 bits (232), Expect = 3e-52 Identities = 207/258 (80%), Gaps = 11/258 (4%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||| | Sbjct 727 GTACAAAGGGCAGGGACGTAATCAACGCGAGCTT-ATGACTCGCGCTTACTGGGAATT-C 670 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGAT-GAAATTTCAAAGATT 119 |||||| | | ||||||||||| | ||||| | ||||| || || | | || Sbjct 669 CTCGTTCATGGGGAACAATTGCAAGCCCCAATCCCTAGCACGAAAGAGGTTCCGCGGGTT 610 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||| ||||| |||||| ||| |||| || ||| | ||||||||||||||||||| Sbjct 609 TCCCCGACCTTTCGGCCTAGGA---AGACACGCTGATGCCTTCAGTGTAGCGCGCGTGCG 553 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG-GCCTAAA 238 ||||||||||||||||||||||||||||||||||||| ||||| || |||| | ||| | Sbjct 552 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT--CGTGCGGCTAGA 496 Query 239 AGGC-CATCTCCCTCGAA 255 || | | | |||||| || Sbjct 495 AGCCGCCTGTCCCTCTAA 478 >seq357611 Length=2761 Score = 185 bits (204), Expect = 1e-44 Identities = 180/226 (80%), Gaps = 7/226 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||||||||||||| |||||| || ||||||||||||| |||||| | Sbjct 2094 GTACAAAGGGCAGGGACGTAGTCAACGTGAGCTT-ATTACTCGCGCTTACTGGGAATT-C 2037 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | | || |||||||| | || || | |||| | |||| | || Sbjct 2036 CTCGTTCATGGGGAAAAATTGCAAGTCCCAATGCCTAGCACGGAGGTGGTTCACTGGGTT 1977 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||||| ||| | ||| |||| || ||| | | |||||||||||||| |||| Sbjct 1976 ACCCCGACCTTCCGGACTAGGA---AGACACGCTGATTCCTTCAGTGTAGCGCGCATGCG 1920 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 ||||||||||||||||||||||||||||||||||||| ||||| || Sbjct 1919 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT 1875 >seq125476 Length=18253 Score = 165 bits (182), Expect = 1e-38 Identities = 176/224 (79%), Gaps = 10/224 (4%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||| ||||| |||| ||||||||||||| |||||| ||||||||| |||||| | Sbjct 13587 GTACAAAGGACAGGGGCGTAATCAACGCGAGCTT-ATGACTTGCGCTTACTGGGAATT-C 13644 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTA-TCCCCATCACGATGAAATTTCAAAGA-T 118 || ||| | ||||||||||| | || | |||||| ||||| | | |||| | | Sbjct 13645 CTTGTTCATAGGGAACAATTGCAA-GCTCAAATCCCCAGCACGAAGGAGGTTCAGCGGGT 13703 Query 119 TACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178 ||||| ||||| |||||| ||| | || || ||| | | || |||| || |||||| Sbjct 13704 TACCCCGACCTTTCGGCCTAGG----AAACACGCTGATTCCTCCATTGTAACGTGCGTGC 13759 Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAA 222 |||| |||||||||||||||||||||| ||||||||| ||||| Sbjct 13760 GGCCTAGAACATCTAAGGGCATCACAGTTCTGTTATTG-CTCAA 13802 >seq528127 Length=3691 Score = 129 bits (142), Expect = 9e-28 Identities = 149/196 (76%), Gaps = 6/196 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||||| ||| ||||||||| |||||| |||| ||| Sbjct 2860 GTACAAAGGGCAGGGACGTAATCAACGCGAACTT-ATGACTCGCCCTTACTGGGAA-TTC 2803 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 |||||| | | ||||||||||| | |||| | ||||| | | |||| | || Sbjct 2802 CTCGTTTATGGGGAACAATTGCAAGTCCCAATCCATAGCACGAAGGAGGTTCAGCGGGTT 2743 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||||| |||||| ||| |||| | || | | |||| ||||||||| |||| Sbjct 2742 ACCCCGACCTTTCGGCCTAGG---AAGACATGCTGGTTCCTTCAGCGTAGCGCGCATGCG 2686 Query 180 GCCCAGAACATCTAAG 195 |||| |||| |||| Sbjct 2685 GCCCGCGACATGTAAG 2670 >seq851035 Length=10992 Score = 125 bits (138), Expect = 1e-26 Identities = 157/218 (72%), Gaps = 43/218 (20%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||| ||||||||| ||||||||||||| |||||||||||||||| |||||| | Sbjct 2675 GTACAAAGGGAAGGGACGTAATCAACGCGAGCTT-ATGACTCGCGCTTACTGGGAATT-C 2618 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAA-GATT 119 |||| |||| || | ||||| | || Sbjct 2617 CTCG--GAAG-------------------------------GAGG----TTCAACTGGTT 2595 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||||| || | | ||| |||| |||||| | | ||||||||||| ||||| | Sbjct 2594 ACCCCGACCTTTCAGTCTAGGA---AGACACGTTGATTCCTTCAGTGTAGCGTGCGTGTG 2538 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 |||||||||||||||||||||||||||||||||||||| Sbjct 2537 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 2500 >seq499640 Length=50596 Score = 125 bits (138), Expect = 1e-26 Identities = 157/218 (72%), Gaps = 43/218 (20%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||| ||||||||| ||||||||||||| |||||||||||||||| |||||| | Sbjct 14448 GTACAAAGGGAAGGGACGTAATCAACGCGAGCTT-ATGACTCGCGCTTACTGGGAATT-C 14505 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAA-GATT 119 |||| |||| || | ||||| | || Sbjct 14506 CTCG--GAAG-------------------------------GAGG----TTCAACTGGTT 14528 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||||| || | | ||| |||| |||||| | | ||||||||||| ||||| | Sbjct 14529 ACCCCGACCTTTCAGTCTAGGA---AGACACGTTGATTCCTTCAGTGTAGCGTGCGTGTG 14585 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 |||||||||||||||||||||||||||||||||||||| Sbjct 14586 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 14623 >seq418993 Length=9518 Score = 114 bits (126), Expect = 2e-23 Identities = 167/233 (72%), Gaps = 26/233 (11%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||| |||||| ||| ||| || |||||||||||||||| ||||| | Sbjct 4734 GTACAAAGGGCAGAGACGTAATCACTATGAGTTT-ATGACTCGCGCTTACTGGGAATC-C 4677 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||| | | ||||||||||| | ||||| ||||| | | || | Sbjct 4676 CTCGTTCATGGGGAACAATTGCAAGTCCCAATCCCTTGCACGAAGGAGTT---------A 4626 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||| ||| | |||||| ||| | || || || |||||||||||||||| Sbjct 4625 CCCCGACTTTTCGGCCTAGGAAA---ACACGCTG----------TGTAGCGCGCGTGCGG 4579 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 |||||||||| || | ||||| |||| ||||||||| ||||| || | ||||| Sbjct 4578 CCCAGAACAT-TATGAGCATCGCAGATCTGTTATTG-CTCAATCTCCTGTGGC 4528 >seq985986 Length=1200 Score = 113 bits (124), Expect = 7e-23 Identities = 91/108 (84%), Gaps = 4/108 (4%) Strand=Plus/Minus Query 118 TTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTG 177 |||||| ||||| |||||| ||| |||| || ||| | | ||||||||||||||||| Sbjct 939 TTACCCCGACCTTTCGGCCTAGGA---AGACACGCTGATTCCTTCAGTGTAGCGCGCGTG 883 Query 178 CGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 ||||||||||||||||||||||| ||||||||| || || ||||| || Sbjct 882 CGGCCCAGAACATCTAAGGGCATTACAGACCTGCTACTG-CTCAATCT 836 >seq987970 Length=1939 Score = 111 bits (122), Expect = 2e-22 Identities = 106/130 (82%), Gaps = 8/130 (6%) Strand=Plus/Minus Query 128 CTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAA 187 || |||||| ||| |||| || | | | | ||||||||||||||||||||||||||| Sbjct 1850 CTTTCGGCCTAGGA---AGACACGCTTATTCCTTCAGTGTAGCGCGCGTGCGGCCCAGAA 1794 Query 188 CATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG-GCCTAAAAGGC-CAT 245 ||||||||||||||||||||||||||||| ||||| || |||| | ||| ||| | | | Sbjct 1793 CATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT--CGTGCGGCTAGAAGCCGCCT 1737 Query 246 CTCCCTCGAA 255 |||||| || Sbjct 1736 GTCCCTCTAA 1727 >seq843596 Length=6342 Score = 107 bits (118), Expect = 3e-21 Identities = 152/212 (72%), Gaps = 30/212 (14%) Strand=Plus/Plus Query 14 GGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCGTTGAAGACC 73 ||||||| || |||||||||| |||| ||||||||||| |||||| ||||||| | Sbjct 849 GGACGTAATCGACGCGAGCTT-ATGATTCGCGCTTACTGGGAATT-CCTCGTTTGTGGGG 906 Query 74 AACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTACCCGGACCTGTCG 133 |||||| |||| | ||||| ||| ||| |||| ||| Sbjct 907 AACAATCGCAAGCCCCAATCCC------------------AAG----CCC--ACCTTTCG 942 Query 134 GCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTA 193 ||| ||| ||| || || | | ||| ||||||||||||| ||||||||||||||| Sbjct 943 GCCTAGGA---AGATGCGCAGATTCCTTCAATGTAGCGCGCGTGTGGCCCAGAACATCTA 999 Query 194 AGGGCATCACAGACCTGTTATTGCCTCAAACT 225 |||||||||||| |||||||||| ||||| || Sbjct 1000 AGGGCATCACAGGCCTGTTATTG-CTCAATCT 1030 >seq901600 Length=4234 Score = 100 bits (110), Expect = 4e-19 Identities = 109/141 (77%), Gaps = 3/141 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||| ||| | ||||||||| ||| |||||||||||||||| |||| || Sbjct 2009 GTACAAAGGGCAGGAACGAAATCAACGCGATCTT-ATGACTCGCGCTTACTGGGAA-CTC 1952 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAG-ATT 119 |||||| | | ||||||||||| | ||| | | ||||| | | |||| | || Sbjct 1951 CTCGTTCACGGGAAACAATTGCAAGCCCCAATCTCTAGCACGAAGGAGGTTCAGCGTGTT 1892 Query 120 ACCCGGACCTGTCGGCCAAGG 140 |||| ||||| |||||| ||| Sbjct 1891 ACCCCGACCTTTCGGCCTAGG 1871 Score = 82.4 bits (90), Expect = 1e-13 Identities = 56/62 (90%), Gaps = 1/62 (2%) Strand=Plus/Minus Query 164 GTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAA 223 ||||| |||||||||||||||||||||||||||||| ||| ||||||||||| ||||| Sbjct 1195 GTGTATAGCGCGTGCGGCCCAGAACATCTAAGGGCATTACATACCTGTTATTG-CTCAAT 1137 Query 224 CT 225 || Sbjct 1136 CT 1135 >seq814768 Length=14582 Score = 93.3 bits (102), Expect = 6e-17 Identities = 125/170 (74%), Gaps = 8/170 (5%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||||||||||||| | | || |||||||| |||| ||| Sbjct 6053 GTACAAAGGGCAGGGACATAATCAACGCGAGCTT-AAGTTTCCCGCTTACTGGGAA-TTC 6110 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||| | | ||||||||||| || |||| | ||| | | |||| ||||| Sbjct 6111 CTCGTTCATGGTGAACAATTGCAAACCCCTTTCCCTAGCAC---GGAGCTTCAGCGATTA 6167 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGC 170 ||| ||||| || ||| || | || || ||| | | |||| ||||| Sbjct 6168 CCCTGACCTTTCAGCC---TTGTAACACACGCTGATTCCTTCAGAGTAGC 6214 >seq287184 Length=257 Score = 89.7 bits (98), Expect = 8e-16 Identities = 51/52 (98%), Gaps = 0/52 (0%) Strand=Plus/Minus Query 177 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 257 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTAAAACTTCC 206 >seq490715 Length=16819 Score = 82.4 bits (90), Expect = 1e-13 Identities = 53/57 (93%), Gaps = 1/57 (2%) Strand=Plus/Plus Query 167 TAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAA 223 ||||||||||| |||||||||||| |||||| |||||||||||||||||| |||||| Sbjct 11396 TAGCGCGCGTGTGGCCCAGAACATTTAAGGGTATCACAGACCTGTTATTG-CTCAAA 11451 >seq668085 Length=2045 Score = 78.8 bits (86), Expect = 1e-12 Identities = 77/97 (79%), Gaps = 2/97 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||| | | | |||||||| | |||||||||||| | Sbjct 245 GTACAAAGGGCAGGGACTTAATCATCACATG-TTGATGACATGTAATTACTAGGAATT-C 302 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCA 97 || ||| |||| || |||| |||| ||||||||||| Sbjct 303 CTTGTTCAAGATTAATAATTACAATAATCTATCCCCA 339 >seq524183 Length=14554 Score = 78.8 bits (86), Expect = 1e-12 Identities = 103/143 (72%), Gaps = 10/143 (7%) Strand=Plus/Plus Query 74 AACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTACCCGGACCTGTCG 133 ||||||||||| | ||||| | ||||| ||| |||| | ||| || ||| Sbjct 12173 AACAATTGCAAGCCACAATCCCTAGCACGAAGAAGGTTCAGCGGTTA-------CTTTCG 12225 Query 134 GCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTA 193 ||| ||| || | || ||| | | ||||||||| |||||| | ||||||||| ||| Sbjct 12226 GCCTAGG---AAGGCACGCTGATTTCTTCAGTGTAGTGCGCGTTCAACCCAGAACACCTA 12282 Query 194 AGGGCATCACAGACCTGTTATTG 216 ||||| |||||||| ||||||| Sbjct 12283 TGGGCAACACAGACCGGTTATTG 12305 >seq294324 Length=5594 Score = 78.8 bits (86), Expect = 1e-12 Identities = 84/109 (77%), Gaps = 4/109 (4%) Strand=Plus/Plus Query 125 GACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCA 184 ||||| || ||| ||| |||| | ||| | | |||||||||| || ||| ||||| Sbjct 2442 GACCTTTCAGCCTAGGA---AGACAAGCTGATTCCTTCAGTGTAGCATGCTTGCAGCCCA 2498 Query 185 GAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 | |||||||| |||||||| |||||||||||| ||||| || ||||| Sbjct 2499 GTACATCTAAAGGCATCACTGACCTGTTATTG-CTCAATCTCGTGTGGC 2546 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741819270780