Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq1094815 196 9e-48 seq851035 190 4e-46 seq490715 167 4e-39 seq843596 143 5e-32 seq457844 129 1e-27 seq357611 116 7e-24 seq499640 114 2e-23 seq90281 100 5e-19 seq785669 89.7 9e-16 seq287183 82.4 1e-13 seq940429 75.2 2e-11 >seq1094815 Length=1382 Score = 196 bits (216), Expect = 9e-48 Identities = 174/214 (81%), Gaps = 3/214 (1%) Strand=Plus/Minus Query 97 TTCAAAGCAGGCCTTTGCTC-GAATACATTAGCATGGAATAATAGAATAGGACGTGCGGT 155 || |||||| ||| | |||| | |||||||||||||| |||| | |||||| | |||| Sbjct 212 TTTAAAGCAAGCCATCGCTCTGGATACATTAGCATGGGATAACATCATAGGAT-TCCGGT 154 Query 156 TCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAG 215 ||||| |||||| | ||| || ||||||||||||||||| ||||||||| | | Sbjct 153 CCTATTGTGTTGGCCTTCGGGATCGGAGTAATGATTAATAGGGACAGTCGGGGGCATTCG 94 Query 216 TATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGT 275 |||| || |||||||||||||||||||||||||| ||||| ||| ||||||||||| | Sbjct 93 TATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACAACTGCGAAAGCAT 34 Query 276 TCACCAAGGATGTTTTCATTAATCAGTGAACGAA 309 | |||||||||||||||||||||| ||||||| Sbjct 33 TTGCCAAGGATGTTTTCATTAATCA-AGAACGAA 1 >seq851035 Length=10992 Score = 190 bits (210), Expect = 4e-46 Identities = 217/284 (76%), Gaps = 8/284 (3%) Strand=Plus/Plus Query 40 TGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTC 99 ||| ||| || | |||| || | | | | || ||||||||||| ||||||||||| | Sbjct 1794 TGCTCTTTACCGAGTGTCGAGGTGGGGCGGCACGTTTACTTTGAACAAATTAGAGTGCTT 1853 Query 100 AAAGCAGGCCTTTGCTC--GAATACATTA-GCATGGAATAATAGAATAGGACGTGCGGTT 156 ||||||||| | | |||||| | |||||||||||| ||||||||| | ||||| Sbjct 1854 AAAGCAGGCAAGCCCGCCTGAATACTGTGTGCATGGAATAATGGAATAGGACCT-CGGTT 1912 Query 157 CTATTTTGTTGGTTTCTAGGA--CCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCA 214 ||||||||||||||| | ||| ||| ||||||||||||||||| || |||||| | Sbjct 1913 CTATTTTGTTGGTTT-TCGGAACCCGAGGTAATGATTAATAGGGACAGGCGGGGGCATTC 1971 Query 215 GTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCG 274 ||||| || ||||||||||||||||||| ||||| ||| |||||||| Sbjct 1972 GTATTGCGACGTTAGAGGTGAAATTCTTGGATCGTCGCAAGACGAACAGAAGCGAAAGCA 2031 Query 275 TTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 || ||||| |||||||||||||||| ||||||||||||| || Sbjct 2032 TTTGCCAAGTATGTTTTCATTAATCA-AGAACGAAAGTTAGAGG 2074 >seq490715 Length=16819 Score = 167 bits (184), Expect = 4e-39 Identities = 210/281 (75%), Gaps = 8/281 (3%) Strand=Plus/Minus Query 40 TGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTC 99 ||| ||| || | |||| || | ||| | || ||||||||||| ||||||||||| | Sbjct 12165 TGCTCTTTACCGAGTGTCGAGGTGGGCCGGAACATTTACTTTGAACAAATTAGAGTGCTT 12106 Query 100 AAAGCAGGCCTTTGCTC--GAATACATTA-GCATGGAATAATAGAATAGGACGTGCGGTT 156 | |||||| | | |||||| | |||||||||||| ||||||||| | | | | Sbjct 12105 AGGGCAGGCAAGGCCACCTGAATACTGTGTGCATGGAATAATGGAATAGGACCT-CAGAT 12047 Query 157 CTATTTTGTTGGTTTCTAGGA--CCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCA 214 ||||||||||||||| | ||| ||| |||| |||||||||||| || | |||| | Sbjct 12046 CTATTTTGTTGGTTT-TCGGAACCCGAGGTAACGATTAATAGGGACAGGCAGGGGCATTC 11988 Query 215 GTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCG 274 ||||| ||||||||||||||||||||||| ||||| ||| || || || Sbjct 11987 GTATTGCGACGTCAGAGGTGAAATTCTTGGATTGTAGCAAGACGAACAGAAGCAAACGCA 11928 Query 275 TTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAG 315 || ||||| |||||||||||||||| ||||||||||||| Sbjct 11927 TTTGCCAAGTATGTTTTCATTAATCA-AGAACGAAAGTTAG 11888 >seq843596 Length=6342 Score = 143 bits (158), Expect = 5e-32 Identities = 186/250 (74%), Gaps = 8/250 (3%) Strand=Plus/Minus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC--GAATACATTA-GCAT 130 || ||| |||| || | |||||| | ||||||||| | | |||||| | || | Sbjct 1709 TTCACTGTGAACAAGTCAGAGTGCTTAAAGCAGGCAAGCCCGCCTGAATACTGTGTGCGT 1650 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGA--CCGCCGTAATG 188 |||||||| |||||| || | |||||||||||||||||||| | ||| ||| |||||| Sbjct 1649 GGAATAATGGAATAGCACCT-CGGTTCTATTTTGTTGGTTT-TCGGAACCCGAGGTAATG 1592 Query 189 ATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTT 248 ||||||||||| | || ||| | ||||| || |||||||||||||| |||| Sbjct 1591 ATTAATAGGGACAAGCGAGGGGATTCGTATTGCGACGTTAGAGGTGAAATTCTCGGATCG 1532 Query 249 ATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGA 308 ||||| ||| | |||||| || ||||| ||||||||||||||| | |||||| Sbjct 1531 TCGCAAGACGAACAGAAGGGAAAGCATTTGCCAAGTATGTTTTCATTAATC-GAGAACGA 1473 Query 309 AAGTTAGGGG 318 ||||||| || Sbjct 1472 AAGTTAGAGG 1463 >seq457844 Length=2555 Score = 129 bits (142), Expect = 1e-27 Identities = 149/194 (77%), Gaps = 5/194 (3%) Strand=Plus/Minus Query 127 GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACC-GCCGTA 185 |||||||||||| || |||| | | ||| |||||||||||||||| | ||||| | ||| Sbjct 756 GCATGGAATAATGGATTAGGTCTT-CGGGTCTATTTTGTTGGTTT-TCGGACCCGAGGTA 699 Query 186 A-TGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244 | | ||||||||||| || || ||| | ||||| |||||||||||||||||||| Sbjct 698 AATAATTAATAGGGACAGGCGAGGGCATTCGTATTGCGACGTCAGAGGTGAAATTCTTGG 639 Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304 || ||||| ||| || || || || ||||| |||||||||||||||| || Sbjct 638 ATCGTCGCAAGACGAACAGAAGCAAACGCATTTGCCAAGTATGTTTTCATTAATCA-AGA 580 Query 305 ACGAAAGTTAGGGG 318 ||||||||||| || Sbjct 579 ACGAAAGTTAGAGG 566 >seq357611 Length=2761 Score = 116 bits (128), Expect = 7e-24 Identities = 195/276 (71%), Gaps = 6/276 (2%) Strand=Plus/Plus Query 40 TGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTC 99 ||| ||| || | |||| || | ||| | || |||| ||| || ||||||| | Sbjct 1167 TGCTCTTTACAGAGTGTCGAGGCGGGCCGGCACGTTTAATTTCTTCCAAGTAGAGTGCTT 1226 Query 100 AAAGCAGGCCTTTGCTC--GAATACATTA-GCATGGAATAATAGAATAGGACGTGCGGTT 156 ||||||||| | | |||||| | ||||||| |||| | ||||||| | ||||| Sbjct 1227 AAAGCAGGCAAGCCCACCTGAATACTGTGTGCATGGAGTAATGGTATAGGACCT-CGGTT 1285 Query 157 CTATTTTGTTGGTTTCTAGGACC-GCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAG 215 ||||||||||| ||| || ||| | |||||||||||||||| || |||||| | | Sbjct 1286 CTATTTTGTTGTTTTTCAGAACCCGAGGTAATGATTAATAGGGGCAGGCGGGGGCATTCG 1345 Query 216 TATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGT 275 |||| || |||||||||||||||||| ||||| | |||||||| | Sbjct 1346 TATTACGACGTTAGAGGTGAAATTCTTGGACCGTCGCAAGACGGAAAGAAGCGAAAGCAT 1405 Query 276 TCACCAAGGATGTTTTCATTAATCAGTGAACGAAAG 311 | ||||| ||||||||||| ||| || |||||| Sbjct 1406 TTGCCAAGTATGTTTTCATTCTTCA-AGAGCGAAAG 1440 >seq499640 Length=50596 Score = 114 bits (126), Expect = 2e-23 Identities = 123/159 (77%), Gaps = 4/159 (3%) Strand=Plus/Minus Query 162 TTGTTGGTTTCTAGGA--CCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATT 219 |||||||||| | ||| ||| ||||||||||||||| | ||| ||||| | ||||| Sbjct 15205 TTGTTGGTTT-TCGGAACCCGAGGTAATGATTAATAGGTACAGTTGGGGGCATTCGTATT 15147 Query 220 CAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCAC 279 ||| ||||||||||||||||||| ||||| ||| |||||||| || | Sbjct 15146 GCTATGTTAGAGGTGAAATTCTTGGATCGTCGCAAGACGAACAGAAGCGAAAGCATTTGC 15087 Query 280 CAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 |||| |||||||||||||||| ||||||||||||| || Sbjct 15086 CAAGTATGTTTTCATTAATCA-AGAACGAAAGTTAGAGG 15049 >seq90281 Length=6193 Score = 100 bits (110), Expect = 5e-19 Identities = 148/203 (73%), Gaps = 15/203 (7%) Strand=Plus/Minus Query 117 GAATAC-ATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAG 175 |||||| || ||||||||||| ||||||||| | ||||||| || |||| |||| | Sbjct 1969 GAATACTATGTGCATGGAATAAAGGAATAGGACCT-CGGTTCTGTTCTGTTCGTTTTCAA 1911 Query 176 GACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGA 235 || ||||||||||||||||| | |||||| | |||| |||| |||||| Sbjct 1910 GAG----GTAATGATTAATAGGGACAAGCGGGGGCATTCTTATTACGACGTCACAGGTGA 1855 Query 236 AATTCTTGGATTTATTGAAGACTAACTACTGCGAA---AGCGTTCACCAAGGATGTTTTC 292 || | || || | | ||||| | | ||||| ||| || ||||| |||||||| Sbjct 1854 AACTTTTAGA--TCGTCAAGACGA---AAAGCGAAAGCAGCATTTGCCAAGTATGTTTTC 1800 Query 293 ATTAATCAGTGAACGAAAGTTAG 315 |||||||| ||||||||||||| Sbjct 1799 ATTAATCA-AGAACGAAAGTTAG 1778 >seq785669 Length=8164 Score = 89.7 bits (98), Expect = 9e-16 Identities = 71/82 (87%), Gaps = 4/82 (5%) Strand=Plus/Minus Query 130 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGA--CCGCCGTAAT 187 ||||||||| ||||||||| | |||||||||||||||||||| | ||| ||| ||||| Sbjct 92 TGGAATAATGGAATAGGACCT-CGGTTCTATTTTGTTGGTTT-TCGGAACCCGAGGTAAT 35 Query 188 GATTAATAGGGATAGTCGGGGG 209 |||||||||||| || |||||| Sbjct 34 GATTAATAGGGACAGGCGGGGG 13 >seq287183 Length=282 Score = 82.4 bits (90), Expect = 1e-13 Identities = 101/132 (77%), Gaps = 7/132 (5%) Strand=Plus/Plus Query 69 GGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTT--GCTCGAATACATTA 126 |||| |||| ||| |||| |||||||| ||||||||| ||| ||| |||| ||| Sbjct 118 GGACAATTACCATGAGCAAATCAGAGTGTTTAAAGCAGGCTTTTAAGCTTGAATGTGTTA 177 Query 127 GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTT-GTTGGTTTCTAGG-ACCGCCGT 184 |||||||||||| |||| ||| | || ||||||| ||||||| |||| || | || Sbjct 178 GCATGGAATAATGAAATATGAC-TTTAGTCCTATTTTCGTTGGTT--TAGGTACTTCAGT 234 Query 185 AATGATTAATAG 196 |||||| ||||| Sbjct 235 AATGATGAATAG 246 >seq940429 Length=1377 Score = 75.2 bits (82), Expect = 2e-11 Identities = 75/96 (78%), Gaps = 1/96 (1%) Strand=Plus/Minus Query 152 CGGTTCTATTTTGTTGGTTTCTAGGACC-GCCGTAATGATTAATAGGGATAGTCGGGGGT 210 |||||||||||||||||||| || ||| | ||||||||||||||||| || ||| || Sbjct 632 CGGTTCTATTTTGTTGGTTTTCAGAACCCGATGTAATGATTAATAGGGACAGGCGGTGGC 573 Query 211 GTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGAT 246 | ||||| | | ||||||||||||||||| Sbjct 572 ATTCGTATTGCGACATTACAGGTGAAATTCTTGGAT 537 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 902410153216