Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq419460 134 6e-29 seq940428 123 1e-25 seq227010 107 8e-21 seq89979 77.0 1e-11 >seq419460 Length=11229 Score = 134 bits (148), Expect = 6e-29 Identities = 124/154 (81%), Gaps = 5/154 (3%) Strand=Plus/Minus Query 30 CTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCT 89 ||||||||| |||| |||| ||| || |||||||| || |||| |||||| | | ||| Sbjct 899 CTCCTTCGA---GTCGGGTTGCTTGAGAGTGCAGCTCCAAGTGGGTGGTAAACTCCATCT 843 Query 90 AAAGCTAAATATTGGCCA-GAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAA 148 | |||||||| | ||| ||||||||||||| ||||||| |||| ||||| |||||| Sbjct 842 GAGACTAAATAT-GACCACGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGTTGAAAA 784 Query 149 GCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAA 182 | |||||| | |||||||| ||||| |||||||| Sbjct 783 GAACTTTGAAGAGAGAGTTCAAAAGTACGTGAAA 750 Score = 78.8 bits (86), Expect = 4e-12 Identities = 71/87 (82%), Gaps = 3/87 (3%) Strand=Plus/Minus Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGG-TGT-- 461 || ||||||||| |||||||||||||||||||||||| | |||||| ||||| ||| Sbjct 252 CGACCCGTCTTGAAACACGGACCAAGGAGTCTAACATGTGCGCGAGTCATTGGGCTGTAC 193 Query 462 CAAACCCGTGCGCGTAATGAAAGTGAA 488 ||||| |||||||||||||||| Sbjct 192 GAAACCTAAAGGCGTAATGAAAGTGAA 166 >seq940428 Length=9268 Score = 123 bits (136), Expect = 1e-25 Identities = 104/128 (81%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 |||||||| ||||||||| |||||||||||||||||||||| ||| || | ||| Sbjct 8060 AGAGCATACACGTTGGGACCAGAAAGATGGTGAACTATGCCTGGCCAGGAGGACGTCAGG 8001 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673 |||||| |||||||||| | ||| ||||| ||||||||||| |||||| | ||||| Sbjct 8000 GGAAACCCTGGTGGAGGTCTGTAGCAATTCTGACGTGCAAATCGTTCGTCAGAGCTGGGT 7941 Query 674 ATAGGGGC 681 |||||||| Sbjct 7940 ATAGGGGC 7933 >seq227010 Length=3563 Score = 107 bits (118), Expect = 8e-21 Identities = 95/119 (80%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 565 GTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGG 624 |||||||||||||||||||| ||||||||||| |||| || ||| ||||| ||| Sbjct 1493 GTTGGGACCCGAAAGATGGTCAACTATGCCTGGCTAGGACAAAATCAGGGGAAATCCTGA 1552 Query 625 TGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||| || |||| ||||| ||||||||| ||| ||| | ||||||||||||||| Sbjct 1553 CGGAGGTCCGTAGCGATTCTGACGTGCAAATTGATGGTCGGAGCTGGGTATAGGGGCGA 1611 >seq89979 Length=2176 Score = 77.0 bits (84), Expect = 1e-11 Identities = 62/75 (83%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 571 ACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGG 630 |||||||||||||||||||||||||| ||| |||| ||| |||||| ||| |||||| Sbjct 237 ACCCGAAAGATGGTGAACTATGCCTGGCCAGGACGAAGTCAGGGGAAACCCTGATGGAGG 178 Query 631 CTCGCAGCGGTTCTG 645 || |||| ||||| Sbjct 177 TCCGTAGCGATTCTG 163 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2050023796600