Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq517028 178 2e-42 seq1193412 93.3 6e-17 >seq517028 Length=6016 Score = 178 bits (196), Expect = 2e-42 Identities = 191/251 (76%), Gaps = 5/251 (2%) Strand=Plus/Plus Query 2 TTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACG 61 ||| |||||| |||||||||||||||| || ||||| || |||| | || || ||| Sbjct 1528 TTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTC-GTGTTTGCAGA 1586 Query 62 GACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAA 121 | ||||||||||| ||||||||||| | || | ||| ||||| || |||| | Sbjct 1587 GTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGAGCTTAC 1646 Query 122 CACGT----CGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCC 177 || | |||||| || ||| | ||||||||||||||||||| ||||||||||| Sbjct 1647 GGGGTAAACCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCATTTTGCC 1706 Query 178 GAATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTC 237 | |||||| ||| ||||| | | | |||||| |||||||||||| ||||||||||||| Sbjct 1707 TAGTTCCTTCACCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCCGACCACCTGTGTC 1766 Query 238 GGTTTACGGTA 248 ||||| |||| Sbjct 1767 GGTTTGGGGTA 1777 >seq1193412 Length=224 Score = 93.3 bits (102), Expect = 6e-17 Identities = 85/106 (80%), Gaps = 1/106 (1%) Strand=Plus/Minus Query 143 CACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACCCG 202 ||| | ||||||||||||||| | | ||||||||||| |||||| | | ||| ||| Sbjct 224 CACTCTTTCTCCCGAAGTTACAGAGTCATTTTGCCGAGTTCCTTCAGTATTGTTATCCC- 166 Query 203 AACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248 ||| ||||||||||||||| | | ||||||||||||||| | ||| Sbjct 165 AACATCTTAGTATTCTCTACTTAATCACCTGTGTCGGTTTGCAGTA 120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 684999071316