Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq517028 535 1e-149 seq1381452 158 4e-36 >seq517028 Length=6016 Score = 535 bits (592), Expect = 1e-149 Identities = 421/500 (84%), Gaps = 8/500 (2%) Strand=Plus/Minus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||||||| ||||||||| |||||||||||| ||||||||||||||||||||| Sbjct 4586 TACGGCCGCAAGGTTAAAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGAGCAT 4527 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 ||||||||||||||||||||||||||||||||||| |||||||| || || | || Sbjct 4526 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCTGGCCTTGACATGCTGAGAACTTTC 4467 Query 121 TAGAGATAGA--GGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTC 178 |||||| || ||| |||||||| || || ||||||| ||||||| ||||||| Sbjct 4466 CAGAGATGGATTGGTG---CCTTCGGGA-ACTCAGACACAGGTGCTGCATGGCTGTCGTC 4411 Query 179 AGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTT 238 ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| Sbjct 4410 AGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGTAACGAGCGCAACCCTTGTCCTTAGTT 4351 Query 239 GCCATCA--TTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGG 296 ||| || ||| | ||||||||||||| |||||||||||||||||||||||||||||| Sbjct 4350 ACCAGCACGTTATGGTGGGCACTCTAAGGAGACTGCCGGTGACAAACCGGAGGAAGGTGG 4291 Query 297 GGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACA 356 ||| |||||||| |||||||| |||||| | ||||||||||||||||||||||| | Sbjct 4290 GGATGACGTCAAGTCATCATGGCCCTTACGGCCAGGGCTACACACGTGCTACAATGGTCG 4231 Query 357 ATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGG 416 ||||||||| || |||||||||||| ||| ||||||||||| | || ||| ||| Sbjct 4230 GTACAAAGGGTTGCCAAACCGCGAGGTGGAGCTAATCCCATAAAACCGATCGTAGTCCGG 4171 Query 417 ATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATG 476 || | |||||||||||||||| ||||| |||||||||||||||||| ||||| | | Sbjct 4170 ATCGCAGTCTGCAACTCGACTGCGTGAAGTCGGAATCGCTAGTAATCGTGAATCAGAACG 4111 Query 477 CTACGGTGAATACGTTCCCG 496 |||||||||||||||||| Sbjct 4110 TCACGGTGAATACGTTCCCG 4091 >seq1381452 Length=1021 Score = 158 bits (174), Expect = 4e-36 Identities = 238/335 (71%), Gaps = 15/335 (4%) Strand=Plus/Plus Query 157 CAGGTGATGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAA-- 214 |||||| ||||||| ||| ||||||||||| ||||| | | | |||| | || || Sbjct 366 CAGGTGTTGCATGGCCGTCACCAGCTCGTGTCATGAGACGGTCGATTAACTTCCTTAAAA 425 Query 215 CGAGCGCAACCCTTAAGCTTAGTTGCCATCATTAAGTTGGGCACTCTAAGTTGACTGCCG 274 |||||| ||||| | || | || |||||| | | || | | |||||| Sbjct 426 CGAGCGTAACCCCTTTCCTGAATT--------TAAGTTTTG---TTTAGGAT-ACTGCCT 473 Query 275 GTGACAAACCGGAGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGC 334 ||| | | |||||||||| |||| || ||| || ||||| || ||| |||||| Sbjct 474 ATGAGATATAGGAGGAAGGTTGGGAGGATGTCTGGTCGTCATGACCTAGATGGATTGGGC 533 Query 335 TACACACGTGCTACAATGGACAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATC- 393 ||||||||||||||||||| | ||||||| | | |||| | ||| | | |||||| Sbjct 534 TACACACGTGCTACAATGGTAATTACAAAGAGATGTGAAAATGTGAGTTTTAACAAATCT 593 Query 394 CCATAAAGTTGTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATC 453 ||||| | ||| ||| ||||| || |||| || ||| | ||||| ||||||| Sbjct 594 GTATAAAAATTATCTTAGTCCGGATCGTTTTCTGTAATACGAAAACGTGAAGTTGGAATC 653 Query 454 GCTAGTAATCGTAGATCAGCATGCTACGGTGAATA 488 ||||||||||||| || || ||| ||||||||||| Sbjct 654 GCTAGTAATCGTATATTAGTATGGTACGGTGAATA 688 Score = 86.0 bits (94), Expect = 2e-14 Identities = 84/106 (79%), Gaps = 2/106 (2%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCG-CACAAGCGGTGGAGCA 59 ||| | ||||||||| |||| |||||||||||||| || |||| ||||||||||| Sbjct 187 TACAATCGCAAGGTTTAAACCTAAAGGAATTGACGGAGAATTATCACA-GCGGTGGAGCA 245 Query 60 TGTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGAC 105 ||||||||||| || | ||| ||||||||||||| |||||| Sbjct 246 TGTGGTTTAATCTGATATACCGCATAGAACCTTACCAATCCTTGAC 291 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1482981720320