Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq517028 199 8e-49 seq1383040 86.0 1e-14 seq891402 73.4 8e-11 >seq517028 Length=6016 Score = 199 bits (220), Expect = 8e-49 Identities = 181/228 (79%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 112 GGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCG 171 ||||||||| | |||||||||||||||||||||| ||||| ||||||||||||||| | Sbjct 1159 GGACAGTGTATGGTGGGCAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAG 1100 Query 172 CCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGT 231 | ||| | | ||||| || ||||| | |||| ||| ||||||||||| | | Sbjct 1099 TACGAAGGTGCGCTCAGACCGGTCGGAAATCGGTCGCAGAGTATAAAGGCAAAAGCGCGC 1040 Query 232 TTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTG 291 |||||||||| || || ||| |||||| |||||||| || |||| |||||||| ||| Sbjct 1039 TTGACTGCGAGACAGACACGTCGAGCAGGTACGAAAGTAGGTCTTAGTGATCCGGTGGTT 980 Query 292 CTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 ||| |||||| |||| |||||| ||||||||||| ||| | ||||||| Sbjct 979 CTGTATGGAAGGGCCATCGCTCAACGGATAAAAGGTACTCCGGGGATA 932 >seq1383040 Length=1059 Score = 86.0 bits (94), Expect = 1e-14 Identities = 161/236 (68%), Gaps = 13/236 (6%) Strand=Plus/Minus Query 112 GGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCG 171 ||||||| | | || |||||||||||||||||||||||| ||| ||||||||||||| Sbjct 747 GGACAGTTTATGATGGTTAGTTTGACTGGGGCGGTCGCCTCCTAAAAAGTAACGGAGGCG 688 Query 172 CCCAAAGATACCCTCAGCTTGGATGGA---AACCATGCGCACA-----GTGCAAAGGCAA 223 ||||| || | |||| || | ||| | | | ||| || ||| Sbjct 687 TGCAAAGGTA-----AACTTGTATTAATTGAACTAAATTAATATGTATGTGTAATGGCTT 633 Query 224 AAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATC 283 ||| || ||||||| || | ||| | || |||| |||||||| || | || ||||| Sbjct 632 AAGTTTGCTTGACTGTGAGATTAACAAATTTAACAGGAACGAAAGTTGGTCATAGTGATC 573 Query 284 CGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 ||| | || ||||| ||||| ||||||||||| ||| | ||||||| Sbjct 572 CGGTAATTTTGTGTGGAAAAATTATCGCTTAACGGATAAAAGGTACGCAGGGGATA 517 >seq891402 Length=3035 Score = 73.4 bits (80), Expect = 8e-11 Identities = 58/70 (83%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 112 GGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCG 171 ||||||| | | || |||||||||||||||||||||||| ||| ||||||||||||| Sbjct 869 GGACAGTTTATGATGGTTAGTTTGACTGGGGCGGTCGCCTCCTAAAAAGTAACGGAGGCG 810 Query 172 CCCAAAGATA 181 ||||| || Sbjct 809 TGCAAAGGTA 800 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 968671038592