Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq523060 91.5 9e-17 seq357611 75.2 7e-12 seq528127 73.4 2e-11 >seq523060 Length=1424 Score = 91.5 bits (100), Expect = 9e-17 Identities = 75/86 (87%), Gaps = 4/86 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||||| |||| || ||||||||| ||||||||||| |||||||||| Sbjct 776 TCCGAA-GACCTCACTAAATCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 720 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| |||||| |||| Sbjct 719 GGCAGGGACGTAAT-CAACGCGAGCT 695 >seq357611 Length=2761 Score = 75.2 bits (82), Expect = 7e-12 Identities = 64/75 (85%), Gaps = 3/75 (4%) Strand=Plus/Minus Query 50 TCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGT 109 ||||||| |||| || ||||||||| |||| |||||| ||||||||||||||||||||| Sbjct 2133 TCACTAAATCATT-CAATCGGTAGTA-GCGATGGGCGGTGTGTACAAAGGGCAGGGACGT 2076 Query 110 AATACAACGCAAGCT 124 | | ||||| |||| Sbjct 2075 AGT-CAACGTGAGCT 2062 >seq528127 Length=3691 Score = 73.4 bits (80), Expect = 2e-11 Identities = 68/81 (84%), Gaps = 4/81 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||||| |||| ||| |||| || | ||||||||| |||||||||| Sbjct 2909 TCCGAA-GAACTCACTAAATCATTCAATT-GGTAATA-GTGACGGGCGGTGTGTACAAAG 2853 Query 99 GGCAGGGACGTAATACAACGC 119 |||||||||||||| |||||| Sbjct 2852 GGCAGGGACGTAAT-CAACGC 2833 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 296859072560