Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq517028 242 6e-62 seq1323899 80.6 4e-13 >seq517028 Length=6016 Score = 242 bits (268), Expect = 6e-62 Identities = 223/282 (79%), Gaps = 0/282 (0%) Strand=Plus/Plus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 ||||||||||||| |||||| |||||| | |||||| | |||||||||||||||||| Sbjct 4702 CCCACGCTTTCGCACCTCAGTGTCAGTGTCAGTCCAGGTAGTCGCCTTCGCCACTGGTGT 4761 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 |||| | ||||||||||||||||||||||||| | |||||| | ||||| | |||| Sbjct 4762 TCCTTCCAATATCTACGCATTTCACCGCTACACTGGAAATTCCACTACCCTCTACCGCAC 4821 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180 || || | ||||||| |||||| |||||||||| | ||||||||| ||| Sbjct 4822 TCTAGCCAGACAGTTTTGGATGCAGTTCCCAGGTTGAGCCCGGGGATTTCACATCCAACT 4881 Query 181 TGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACG 240 | | || ||||| ||| |||||| |||| ||| |||| |||||||||| ||| || Sbjct 4882 TATCAAGCCACCTACGCGCGCTTTACGCCCAGTAATTCCGATTAACGCTTGCACCCTTCG 4941 Query 241 TATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTC 282 |||||||||||||||||||||| ||||||||| |||||||| Sbjct 4942 TATTACCGCGGCTGCTGGCACGAAGTTAGCCGGTGCTTATTC 4983 >seq1323899 Length=509 Score = 80.6 bits (88), Expect = 4e-13 Identities = 74/94 (79%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247 || |||||| ||||||||| |||| ||| | ||||| |||| | || ||| ||||| Sbjct 341 CCACCTACATGCCCTTTACGCCCAGTAAGGATGAATAACACTTGTCCCCCCCGTTTTACC 282 Query 248 GCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATT 281 ||||||||||||||| |||| |||| | ||| || Sbjct 281 GCGGCTGCTGGCACGAAGTTTGCCGGGACTTCTT 248 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 817579536732