Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= AAMG01001851.1 Length=140 Score E Sequences producing significant alignments: (Bits) Value seq517028 136 3e-30 seq1383040 80.6 2e-13 >seq517028 Length=6016 Score = 136 bits (150), Expect = 3e-30 Identities = 113/138 (82%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 ||||||||||||||||||||||||||||||||| || | |||||||||||||| ||||| Sbjct 943 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATACAGAACCACCGGATCACTAAGACCTA 1002 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTAT 120 |||||| | |||||| | ||| ||||||| |||||| | |||||||| || ||| | Sbjct 1003 CTTTCGTACCTGCTCGACGTGTCTGTCTCGCAGTCAAGCGCGCTTTTGCCTTTATACTCT 1062 Query 121 CACTACGATTTCCGACCG 138 ||||||||||||| Sbjct 1063 GCGACCGATTTCCGACCG 1080 >seq1383040 Length=1059 Score = 80.6 bits (88), Expect = 2e-13 Identities = 88/117 (75%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 ||||||||||||||| |||||| ||||| || | ||||||||||||||||| Sbjct 528 TACCTTTTATCCGTTAAGCGATAATTTTTCCACACAAAATTACCGGATCACTATGACCAA 587 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCAC 117 |||||| ||| | | ||||| |||| || ||||||| |||| |||||| ||| Sbjct 588 CTTTCGTTCCTGTTAAATTTGTTAATCTCACAGTCAAGCAAACTTAAGCCATTACAC 644 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347388276400