Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq851035 113 5e-23 seq1094815 104 2e-20 seq490715 91.5 1e-16 seq357611 77.0 3e-12 seq457844 73.4 4e-11 >seq851035 Length=10992 Score = 113 bits (124), Expect = 5e-23 Identities = 135/180 (75%), Gaps = 4/180 (2%) Strand=Plus/Plus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC--GAATACATTAC- 66 || ||||||||||| ||||||||| | | ||||||||| | | |||||| | Sbjct 1825 ACGTTTACTTTGAACAAATTAGAGTGCTTAAAGCAGGCAAGCCCGCCTGAATACTGTGTG 1884 Query 67 CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAA 126 ||||||||||| ||||||||| | |||||||||||||| ||||| | ||| |||| Sbjct 1885 CATGGAATAATGGAATAGGACCT-CGGTTCTATTTTGTTGGTTTTCGGAACCCGAGGTAA 1943 Query 127 TGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGAT 186 |||| |||| ||| || |||||| | ||||| || | ||||||||||||||||| Sbjct 1944 TGATTAATAGGGACAGGCGGGGGCATTCGTATTGCGACGTTAGAGGTGAAATTCTTGGAT 2003 >seq1094815 Length=1382 Score = 104 bits (114), Expect = 2e-20 Identities = 119/156 (76%), Gaps = 3/156 (2%) Strand=Plus/Minus Query 36 TTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGAATAATAGAATAGGACGTGCGGT 94 || |||||| ||| | |||| | |||||||| ||||| |||| | |||||| | |||| Sbjct 212 TTTAAAGCAAGCCATCGCTCTGGATACATTAGCATGGGATAACATCATAGGAT-TCCGGT 154 Query 95 TCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAAATACGGATAGTCGGGGGTGTCA 154 ||||| ||| || | ||| || |||||||| |||| ||| ||||||||| | Sbjct 153 CCTATTGTGTTGGCCTTCGGGATCGGA-GTAATGATTAATAGGGACAGTCGGGGGCATTC 95 Query 155 GTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190 ||||| || |||| ||||||||||||||||||||| Sbjct 94 GTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 59 >seq490715 Length=16819 Score = 91.5 bits (100), Expect = 1e-16 Identities = 131/181 (72%), Gaps = 4/181 (2%) Strand=Plus/Minus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC--GAATACATTAC- 66 || ||||||||||| ||||||||| | | | |||||| | | |||||| | Sbjct 12134 ACATTTACTTTGAACAAATTAGAGTGCTTAGGGCAGGCAAGGCCACCTGAATACTGTGTG 12075 Query 67 CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAA 126 ||||||||||| ||||||||| | | | |||||||||| ||||| | ||| |||| Sbjct 12074 CATGGAATAATGGAATAGGACCT-CAGATCTATTTTGTTGGTTTTCGGAACCCGAGGTAA 12016 Query 127 TGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGAT 186 ||| |||| ||| || | |||| | ||||| |||| ||||||||||||||||| Sbjct 12015 CGATTAATAGGGACAGGCAGGGGCATTCGTATTGCGACGTCAGAGGTGAAATTCTTGGAT 11956 Query 187 T 187 | Sbjct 11955 T 11955 >seq357611 Length=2761 Score = 77.0 bits (84), Expect = 3e-12 Identities = 89/119 (75%), Gaps = 1/119 (1%) Strand=Plus/Plus Query 67 CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAA 126 |||||| |||| | ||||||| | |||||||||||||| | ||| || ||| |||| Sbjct 1258 CATGGAGTAATGGTATAGGACCT-CGGTTCTATTTTGTTGTTTTTCAGAACCCGAGGTAA 1316 Query 127 TGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185 |||| |||| || || |||||| | ||||| || | |||||||||||||||| Sbjct 1317 TGATTAATAGGGGCAGGCGGGGGCATTCGTATTACGACGTTAGAGGTGAAATTCTTGGA 1375 >seq457844 Length=2555 Score = 73.4 bits (80), Expect = 4e-11 Identities = 91/121 (75%), Gaps = 3/121 (2%) Strand=Plus/Minus Query 67 CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAA 126 ||||||||||| || |||| | | ||| |||||||||| ||||| | ||||| |||| Sbjct 755 CATGGAATAATGGATTAGGTCTT-CGGGTCTATTTTGTTGGTTT-TCGGACCCGAGGTAA 698 Query 127 -TGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185 | || |||| ||| || || ||| | ||||| |||| |||||||||||||||| Sbjct 697 ATAATTAATAGGGACAGGCGAGGGCATTCGTATTGCGACGTCAGAGGTGAAATTCTTGGA 638 Query 186 T 186 | Sbjct 637 T 637 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505068439680