Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq517028 275 1e-71 seq1383040 159 5e-37 >seq517028 Length=6016 Score = 275 bits (304), Expect = 1e-71 Identities = 217/260 (83%), Gaps = 0/260 (0%) Strand=Plus/Plus Query 16 GCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCACTTGGCA 75 |||||||||| |||||| ||||| ||||| ||| ||||| ||| || |||| |||| Sbjct 622 GCTTAGATGCTTTCAGCGGTTATCTCTTCCGAACATAGCTACCCGGCAATGCCACTGGCG 681 Query 76 GTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCT 135 ||||| || ||||||||||| ||||| ||||||||||||||||| | |||| ||| Sbjct 682 TGACAACCGGAACACCAGAGGTTCGTCCACTCCGGTCCTCTCGTACTAGGAGCAGCCCCT 741 Query 136 CTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCC 195 ||||||| || ||| ||||| | |||||||||||||||||||| ||||||||| ||||| Sbjct 742 CTCAAATCTCAAACGTCCACGGCAGATAGGGACCGAACTGTCTCACGACGTTCTAAACCC 801 Query 196 AGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAG 255 ||||||||| || |||||| ||||||||||| |||||||||||| |||||||||||| Sbjct 802 AGCTCGCGTACCACTTTAAATGGCGAACAGCCATACCCTTGGGACCGGCTTCAGCCCCAG 861 Query 256 GATGAGACGAGCCGACATCG 275 |||| || |||||||||||| Sbjct 862 GATGTGATGAGCCGACATCG 881 >seq1383040 Length=1059 Score = 159 bits (176), Expect = 5e-37 Identities = 135/165 (82%), Gaps = 1/165 (1%) Strand=Plus/Plus Query 111 TCCTCTCGTACTAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCG 170 ||||||||||||||| | |||||| |||| ||| |||| |||||||||| Sbjct 303 TCCTCTCGTACTAAGTTAGGACTTTCTCAATTTTCA-ACGTTCACGGTAGATAGGGACCA 361 Query 171 AACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAA 230 ||||||||| ||||||| | |||||||||| ||| || |||||||||||||||||||||| Sbjct 362 AACTGTCTCACGACGTTTTAAACCCAGCTCACGTACCACTTTAATGGGCGAACAGCCCAA 421 Query 231 CCCTTGGGACCTACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 ||||||| | || ||||| | |||||||| || |||||||||||| Sbjct 422 CCCTTGGAAGCTTCTTCACCTCCAGGATGTGATGAGCCGACATCG 466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 770229370512