Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq523060 228 2e-57 seq357611 199 7e-49 seq125476 187 5e-45 seq528127 140 6e-31 seq287184 134 3e-29 seq851035 122 2e-25 seq499640 122 2e-25 seq987970 120 6e-25 seq985986 120 6e-25 seq418993 118 2e-24 seq901600 105 1e-20 seq843596 105 1e-20 seq490715 96.9 6e-18 seq814768 93.3 8e-17 seq668085 93.3 8e-17 seq294324 73.4 7e-11 >seq523060 Length=1424 Score = 228 bits (252), Expect = 2e-57 Identities = 209/258 (81%), Gaps = 6/258 (2%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| ||||| | ||||| || | ||||| |||||||||||||||| Sbjct 474 CTTCTTAGAGGGACAGGCGGCTTCTAGCCGCACGA-GATTGAG-CAATAACAGGTCTGTG 531 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||||||||||||||||||||||||||||| | || || || | || Sbjct 532 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGAAGGCATCAGCGTGT-CTTC- 589 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 || ||||| |||||| ||| || | || |||| ||||||| ||||| | | ||| Sbjct 590 -CTAGGCCGAAAGGTCGGGGAAACCCGCGGAACCTCTTTCGTGCTAGGGATTGGGGCTTG 648 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 ||||| || | | | |||||||||| || |||||||||| ||||| ||| |||||||||| Sbjct 649 CAATTGTTCCCCATGAACGAGGAATTCCCAGTAAGCGCGAGTCATAAGCTCGCGTTGATT 708 Query 311 ACGTCCCTGCCCTTTGTA 328 |||||||||||||||||| Sbjct 709 ACGTCCCTGCCCTTTGTA 726 >seq357611 Length=2761 Score = 199 bits (220), Expect = 7e-49 Identities = 202/257 (79%), Gaps = 6/257 (2%) Strand=Plus/Plus Query 73 TTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGA 131 |||||||||| || ||| || ||||| || | ||||| ||||||||||||||||| Sbjct 1842 TTCTTAGAGGAACAGGTGGCGTCTAGCCGCACGA-GATTGAG-CAATAACAGGTCTGTGA 1899 Query 132 TGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCAC 191 |||||||||||||||||||||||| |||||||||||||| || || || || | || Sbjct 1900 TGCCCTTAGATGTTCTGGGCCGCATGCGCGCTACACTGAAGGAATCAGCGTGT-CTTC-- 1956 Query 192 CTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGC 251 || | |||||||||| |||||| | || || | | |||||| || || | | |||| Sbjct 1957 CTAGTCCGGAAGGTCGGGGTAACCCAGTGAACCACCTCCGTGCTAGGCATTGGGACTTGC 2016 Query 252 AATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTA 311 |||| || | | | |||||||||| || |||||||||| || || ||| | |||||| || Sbjct 2017 AATTTTTCCCCATGAACGAGGAATTCCCAGTAAGCGCGAGTAATAAGCTCACGTTGACTA 2076 Query 312 CGTCCCTGCCCTTTGTA 328 ||||||||||||||||| Sbjct 2077 CGTCCCTGCCCTTTGTA 2093 >seq125476 Length=18253 Score = 187 bits (206), Expect = 5e-45 Identities = 201/259 (78%), Gaps = 9/259 (3%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| ||||| | |||||| || || ||| ||||||||| ||||| Sbjct 13839 CTTCTTAGAGGGACAGACGGCTTCTAGCCGAACGACATT-GAG-CAATAACAGAACTGTG 13782 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 ||||||||||||||||| |||||||||| || |||| || || || || ||| Sbjct 13781 ATGCCCTTAGATGTTCTAGGCCGCACGCACGTTACAATGGAGGAATCAGCGTGTTT---- 13726 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATA-GAGCATT 249 ||| ||||| |||||| |||||| | | || ||| ||||||||||||| |||| || Sbjct 13725 CCTAGGCCGAAAGGTCGGGGTAACCCGCTGAACCTCCTTCGTGCTGGGGATTTGAGC-TT 13667 Query 250 GCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGAT 309 |||||| || | | ||| |||||| || ||||||||| ||||| ||| ||||||||| Sbjct 13666 GCAATTGTTCCCTATGAACAAGGAATTCCCAGTAAGCGCAAGTCATAAGCTCGCGTTGAT 13607 Query 310 TACGTCCCTGCCCTTTGTA 328 |||| ||||| |||||||| Sbjct 13606 TACGCCCCTGTCCTTTGTA 13588 >seq528127 Length=3691 Score = 140 bits (154), Expect = 6e-31 Identities = 148/193 (77%), Gaps = 3/193 (2%) Strand=Plus/Plus Query 136 CTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTG 195 |||| |||| |||||||| ||||||||| |||| || ||| | || | || || | Sbjct 2670 CTTACATGTCGCGGGCCGCATGCGCGCTACGCTGAAGGAACCAGCATGT-CTTC--CTAG 2726 Query 196 GCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATT 255 |||| |||||| |||||| | | || ||| ||||||| |||| | | |||||||| Sbjct 2727 GCCGAAAGGTCGGGGTAACCCGCTGAACCTCCTTCGTGCTATGGATTGGGACTTGCAATT 2786 Query 256 ATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTC 315 || | | | |||||||||| || |||||| ||| ||||| || ||||||||||||||| Sbjct 2787 GTTCCCCATAAACGAGGAATTCCCAGTAAGGGCGAGTCATAAGTTCGCGTTGATTACGTC 2846 Query 316 CCTGCCCTTTGTA 328 ||||||||||||| Sbjct 2847 CCTGCCCTTTGTA 2859 >seq287184 Length=257 Score = 134 bits (148), Expect = 3e-29 Identities = 82/86 (95%), Gaps = 1/86 (1%) Strand=Plus/Plus Query 70 GGCTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTG 128 |||||||||||| ||||||||||| |||||||| |||||||| ||||||||||||||||| Sbjct 172 GGCTTCTTAGAGAGACTATCGGCTTCAAGCCGAAGGAAGTTTTAGGCAATAACAGGTCTG 231 Query 129 TGATGCCCTTAGATGTTCTGGGCCGC 154 |||||||||||||||||||||||||| Sbjct 232 TGATGCCCTTAGATGTTCTGGGCCGC 257 >seq851035 Length=10992 Score = 122 bits (134), Expect = 2e-25 Identities = 182/258 (71%), Gaps = 43/258 (17%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGCTCA-AGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 ||| |||||||||| ||||| | ||||| || | || || |||||||||||||||| Sbjct 2459 CTTATTAGAGGGACAGGCGGCTAATAGCCGCACGA-GATTCAG-CAATAACAGGTCTGTG 2516 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||||||||||| ||||| ||||||||||| || ||||| | || | Sbjct 2517 ATGCCCTTAGATGTTCTGGGCCACACGCACGCTACACTGAAGGAATCAACGTG-TCTT-- 2573 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 ||| | | | |||||| |||||| | ||| ||| || Sbjct 2574 CCTAGACTGAAAGGTCGGGGTAA-CCAGTTGAAC-CT----------------------- 2608 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 |||| |||||||| || |||||||||| ||||| ||| |||||||||| Sbjct 2609 ----------CCTTC--CGAGGAATTCCCAGTAAGCGCGAGTCATAAGCTCGCGTTGATT 2656 Query 311 ACGTCCCTGCCCTTTGTA 328 |||||||| ||||||||| Sbjct 2657 ACGTCCCTTCCCTTTGTA 2674 >seq499640 Length=50596 Score = 122 bits (134), Expect = 2e-25 Identities = 182/258 (71%), Gaps = 43/258 (17%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCTCA-AGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 ||| |||||||||| ||||| | ||||| || | || || |||||||||||||||| Sbjct 14664 CTTATTAGAGGGACAGGCGGCTAATAGCCGCACGA-GATTCAG-CAATAACAGGTCTGTG 14607 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||||||||||| ||||| ||||||||||| || ||||| | || | Sbjct 14606 ATGCCCTTAGATGTTCTGGGCCACACGCACGCTACACTGAAGGAATCAACGTG-TCTT-- 14550 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 ||| | | | |||||| |||||| | ||| ||| || Sbjct 14549 CCTAGACTGAAAGGTCGGGGTAA-CCAGTTGAAC-CT----------------------- 14515 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 |||| |||||||| || |||||||||| ||||| ||| |||||||||| Sbjct 14514 ----------CCTTC--CGAGGAATTCCCAGTAAGCGCGAGTCATAAGCTCGCGTTGATT 14467 Query 311 ACGTCCCTGCCCTTTGTA 328 |||||||| ||||||||| Sbjct 14466 ACGTCCCTTCCCTTTGTA 14449 >seq987970 Length=1939 Score = 120 bits (132), Expect = 6e-25 Identities = 89/100 (89%), Gaps = 3/100 (3%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| ||||| | ||||| || | ||||| |||||||||||||||| Sbjct 1723 CTTCTTAGAGGGACAGGCGGCTTCTAGCCGCACGA-GATTGAG-CAATAACAGGTCTGTG 1780 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGA 170 |||||||||||||||||||||||||||||||||||||||| Sbjct 1781 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGA 1820 >seq985986 Length=1200 Score = 120 bits (132), Expect = 6e-25 Identities = 167/229 (73%), Gaps = 14/229 (6%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 ||||||||| |||| ||||| | |||| || | ||||| || || ||||||||| Sbjct 802 CTTCTTAGAAGGACAGGCGGCTTCTGGCCGCACGA-GATTGAG-CAGTAGCAGGTCTGTA 859 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||||||||||||||||||||||||||||| || || || | || | Sbjct 860 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGAAGGAATCAGCGTG-TCTT-- 916 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 ||| ||||| |||||| |||||| | | ||| | |||| || | ||| Sbjct 917 CCTAGGCCGAAAGGTCGGGGTAACC--------CGCTGACACTCTGGACATTTGGGCTTG 968 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGC 299 ||||| || | | ||||||||| || |||||||| | ||||| ||| Sbjct 969 CAATTGTTCCCAATGAACGAGGAAGTCCCAGTAAGCGTGAGTCATAAGC 1017 >seq418993 Length=9518 Score = 118 bits (130), Expect = 2e-24 Identities = 160/223 (72%), Gaps = 25/223 (11%) Strand=Plus/Plus Query 106 AGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTAC 165 || ||||| ||||||||| |||| ||||| | || ||||||||||||||||||||||||| Sbjct 4536 AGATTGAG-CAATAACAGATCTGCGATGCTCATA-ATGTTCTGGGCCGCACGCGCGCTAC 4593 Query 166 ACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACT 225 || | || ||| ||| ||||| || ||| |||||| || Sbjct 4594 ACAG----------CGTGTTTT---CCTAGGCCGAAAAGTCGGGGTAA----------CT 4630 Query 226 CTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAG 285 | |||||| ||||| | | |||||||| || | | | ||||||| || || |||||| Sbjct 4631 CCTTCGTGCAAGGGATTGGGACTTGCAATTGTTCCCCATGAACGAGGGATTCCCAGTAAG 4690 Query 286 CGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 |||| ||||| | | | |||||||||| |||||||||||| Sbjct 4691 CGCGAGTCATAAACTCATAGTGATTACGTCTCTGCCCTTTGTA 4733 >seq901600 Length=4234 Score = 105 bits (116), Expect = 1e-20 Identities = 106/138 (77%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 ||| ||||| |||||| |||||| | || ||| ||||||| | ||| | | ||| Sbjct 1871 CCTAGGCCGAAAGGTCGGGGTAACACGCTGAACCTCCTTCGTGCTAGAGATTGGGGCTTG 1930 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 ||||| || | | | |||||||| | || |||||||||| ||||| || |||||||||| Sbjct 1931 CAATTGTTTCCCGTGAACGAGGAGTTCCCAGTAAGCGCGAGTCATAAGATCGCGTTGATT 1990 Query 311 ACGTCCCTGCCCTTTGTA 328 ||| ||||||||||||| Sbjct 1991 TCGTTCCTGCCCTTTGTA 2008 Score = 87.8 bits (96), Expect = 3e-15 Identities = 80/97 (82%), Gaps = 3/97 (3%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| || || | ||| | || | ||||| ||||||||||| ||| Sbjct 1101 CTTCTTAGAGGGACAGGCGACTTCTAGCTGCACGA-GATTGAG-CAATAACAGGTATGTA 1158 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACAC 167 |||||||||||||||||||||||||||||| ||||| Sbjct 1159 ATGCCCTTAGATGTTCTGGGCCGCACGCGCTATACAC 1195 >seq843596 Length=6342 Score = 105 bits (116), Expect = 1e-20 Identities = 171/247 (69%), Gaps = 33/247 (13%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||| ||| |||| | | ||| || | ||||| |||||||||| ||||| Sbjct 1064 CTTCTTAGAGAGACAGGTGGCTTCTACCCGCACGA-GATTGAG-CAATAACAGGCCTGTG 1007 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATC- 189 |||||||||||||||||||||| ||||||||||||| ||| || | || |||| Sbjct 1006 ATGCCCTTAGATGTTCTGGGCCACACGCGCGCTACATTGAAGGAATCTGCG----CATCT 951 Query 190 ACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATT 249 ||| ||||| ||||| | ||| ||||| | | || Sbjct 950 TCCTAGGCCGAAAGGT-------------------------GGGCTTGGGATTGGGGCTT 916 Query 250 GCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGAT 309 || ||| || | | |||||||||| || |||||||||| |||| ||| ||||| ||| Sbjct 915 GCGATTGTTCCCCACAAACGAGGAATTCCCAGTAAGCGCGAATCATAAGCTCGCGTCGAT 856 Query 310 TACGTCC 316 ||||||| Sbjct 855 TACGTCC 849 >seq490715 Length=16819 Score = 96.9 bits (106), Expect = 6e-18 Identities = 80/94 (85%), Gaps = 3/94 (3%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||| ||| |||| || ||||| ||| |||||| |||||||||||||||| Sbjct 11487 CTTCTTAGAGAGACAGGCGGCCTCTAGCCGCACGAA-TTTGAG-CAATAACAGGTCTGTG 11430 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTA 164 || |||||| |||||||||||| ||||||||||| Sbjct 11429 ATACCCTTAAATGTTCTGGGCCACACGCGCGCTA 11396 >seq814768 Length=14582 Score = 93.3 bits (102), Expect = 8e-17 Identities = 102/134 (76%), Gaps = 4/134 (3%) Strand=Plus/Minus Query 195 GGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAAT 254 ||| | |||||| |||||||| | || ||| |||||| |||| || | ||||||| Sbjct 6183 GGCTGAAAGGTCAGGGTAATCGC-TGAAGCTC---CGTGCTAGGGAAAGGGGTTTGCAAT 6128 Query 255 TATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGT 314 | || | | |||||||||| || |||||||| | | | ||| ||||||||||| || Sbjct 6127 TGTTCACCATGAACGAGGAATTCCCAGTAAGCGGGAAACTTAAGCTCGCGTTGATTATGT 6068 Query 315 CCCTGCCCTTTGTA 328 |||||||||||||| Sbjct 6067 CCCTGCCCTTTGTA 6054 >seq668085 Length=2045 Score = 93.3 bits (102), Expect = 8e-17 Identities = 77/94 (82%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 235 TGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCA 294 |||||||||| |||| ||||||| |||| ||| |||||| |||||||| | ||||| Sbjct 339 TGGGGATAGATTATTGTAATTATTAATCTTGAACAAGGAATTCCTAGTAATTACATGTCA 280 Query 295 TCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 ||| || | | |||||| |||||||||||||||| Sbjct 279 TCAACATGTGATGATTAAGTCCCTGCCCTTTGTA 246 >seq294324 Length=5594 Score = 73.4 bits (80), Expect = 7e-11 Identities = 56/65 (86%), Gaps = 1/65 (2%) Strand=Plus/Minus Query 106 AGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTAC 165 || ||||| |||||||||||| |||||||| |||||||| |||||| ||| || ||||| Sbjct 2538 AGATTGAG-CAATAACAGGTCAGTGATGCCTTTAGATGTACTGGGCTGCAAGCATGCTAC 2480 Query 166 ACTGA 170 ||||| Sbjct 2479 ACTGA 2475 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 933962955776