Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq517028 365 1e-98 seq1389530 93.3 1e-16 >seq517028 Length=6016 Score = 365 bits (404), Expect = 1e-98 Identities = 375/483 (78%), Gaps = 9/483 (2%) Strand=Plus/Minus Query 2 CGAGTCCGAACAGGGCGAC-AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCAT 60 |||||| || |||||| | |||||||||| ||||||||||||| | |||||| |||| Sbjct 2745 CGAGTCTTAATAGGGCGTCTAGTCGCTGGGAATAGACCCGAAACCGGGCGATCTATCCAT 2686 Query 61 GGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAAT 120 | |||| ||||||| |||||||| ||||||| ||||||||||| |||||||| Sbjct 2685 GAGCAGGTTGAAGGTTAGGTAACACTGACTGGAGGACCGAACCCACTTCCGTTGAAAAGG 2626 Query 121 TAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTC 180 ||||||||| ||||| | || |||||||||||| ||| || ||| ||||||||||||| Sbjct 2625 CAGGGGATGACTTGTGGATCGGAGTGAAAGGCTAATCAAGCTCGGAGATAGCTGGTTCTC 2566 Query 181 TCCGAAAACTATTTAGGTAGTGCCTCAAGTATCACCATCGGGGGTAGAGCACTGTTATGG 240 ||||| |||||||||||| |||||| ||||||| | ||||||||||||||||| || Sbjct 2565 CTCGAAAGCTATTTAGGTAGCGCCTCATGTATCACTCTGGGGGGTAGAGCACTGTTTCGG 2506 Query 241 CTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCAGT-TTTAC 299 |||||||||||| |||||||||||||| |||||||||||||| | || ||| | Sbjct 2505 CTAGGGGGTCATCCCGACTTACCAAACCGATGCAAACTCCGAATACCCAGAAGTGCCGAG 2446 Query 300 CGCGGGAG--TGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACT 357 | ||||| | ||| ||||||||| |||||| | ||| || || || ||| Sbjct 2445 CATGGGAGACACACGGC--GGGTGCTAACGTCCGTCGTGAAAAGGGAAACAACCCAGACC 2388 Query 358 ATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGACA 417 |||||||||| ||| || | | ||||| | ||||| || || ||| ||||| Sbjct 2387 GTCAGCTAAGGTCCCAAAGTCCTGGTTAAGTGGTA--AACGATGTGGGAAGGCTTAGACA 2330 Query 418 GCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTC 477 ||||||| |||||||| |||||||||| | |||||||| |||||| |||||||||||| Sbjct 2329 GCTAGGAGGTTGGCTTAGAAGCAGCCA-CCCTTTAAAGAAAGCGTAATAGCTCACTAGTC 2271 Query 478 GAG 480 ||| Sbjct 2270 GAG 2268 >seq1389530 Length=1297 Score = 93.3 bits (102), Expect = 1e-16 Identities = 127/174 (73%), Gaps = 5/174 (3%) Strand=Plus/Minus Query 33 TAGACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGTAAC-ACGCCCTG 91 ||||||||||||||||||||||| ||| |||| ||||| | | | | || Sbjct 927 TAGACCCGAAACCAAGTGATCTAGTTATGAACAGGTTGAAGATAATTTTATTAATTATTG 868 Query 92 GAGGTCCGAACCCACTAATGTTGAAAAA--TTAGGGGATGAGCTGTGGGTAGGGGTGAAA 149 |||| |||||| |||||||||| ||| | |||| | | ||||||||||| Sbjct 867 GAGGACCGAACTTGTATTTGTTGAAAAAAATTAAG--ATGATTTATAATTAGGGGTGAAA 810 Query 150 GGCTAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGC 203 ||| || |||||||||| |||||||||| || ||||| ||||||| |||| || Sbjct 809 GGCCAATCAAACTTGGAGATAGCTGGTTTTCCGCGAAATCTATTTAAGTAGGGC 756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1665987975168