Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq517028 210 4e-52 >seq517028 Length=6016 Score = 210 bits (232), Expect = 4e-52 Identities = 245/328 (75%), Gaps = 16/328 (5%) Strand=Plus/Minus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 || ||| | ||||||||||||||| | | |||||||||| ||||| |||| ||||||| Sbjct 3357 AGCGCATACGGTGGATGCCTTGGCAGTCAGAGGCGATGAAAGACGTGATAGCCTGCGATA 3298 Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120 |||| ||| ||| ||||| || ||| ||| |||| || |||||||| ||||| | Sbjct 3297 AGCTTCGGTGAGGTGGCAAATGACCTGTGACCCGGAGATCTCTGAATGGGGGAACCCACC 3238 Query 121 C--CTT----TGGGTCATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAAC 174 | | | ||| || | |||||| |||||| | | |||||| || |||| Sbjct 3237 TAGCATAAGCTAGGT-ATCTTAACCTGAATCCATAGGGTTAAGAGGCGAACCAGGGGAAC 3179 Query 175 TGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAG 234 ||||||||||||||| | |||||||||||||||||||||||||| |||||||||||| Sbjct 3178 TGAAACATCTAAGTACCCTGAGGAAAAGAAATCAACCGAGATTCCCTTAGTAGTGGCGAG 3119 Query 235 CGAAATGGGATGAGCCTTTACGAGATAGTTGAATTGA---TAGTGGAATCCTCTGGAAAT 291 |||| |||| |||| ||| |||||| |||| ||| |||| ||||||||| Sbjct 3118 CGAACGGGGACCAGCCCTTA------AGTTGATTTGAGAGTAGCGGAACGCTCTGGAAAG 3065 Query 292 AGGAGCCATAGCGGGTGATAGCCCCGTA 319 | ||||||| |||||||||||| ||| Sbjct 3064 TGCGGCCATAGTGGGTGATAGCCCTGTA 3037 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905565433472