Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq517028 165 2e-38 >seq517028 Length=6016 Score = 165 bits (182), Expect = 2e-38 Identities = 210/285 (74%), Gaps = 7/285 (2%) Strand=Plus/Plus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTA-CATACAAGCTCCCACA-- 57 ||||||||||||| ||||||||| ||||||||| |||| | | || ||| || Sbjct 4951 GGCTGCTGGCACGAAGTTAGCCGGTGCTTATTCTGTTGGTAACGTCAAAACTCACAGGTA 5010 Query 58 --CG-TGGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCT 114 || | || || |||| | |||| ||||| | ||| || ||||| || Sbjct 5011 TTCGCTATGAGCCCTTCCTCCCAACTTAAAGTGCTTTACGACCCGAAGG-CCTTCTTCAC 5069 Query 115 TCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTC 174 ||||| | ||||||| |||| || ||| |||||| |||||||||| |||||||||||| Sbjct 5070 ACACGCGGCATGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 5129 Query 175 CCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCT 234 |||||||||| |||||||||||||||||||| |||| || | |||||||||| | | Sbjct 5130 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 5189 Query 235 ATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279 | ||||| | || ||| |||| |||||| || |||| ||||| Sbjct 5190 ACGGATCGTCGCCTTGGTAGGCCTTTACCCTACCAACTAGCTAAT 5234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1053863605504