Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18] 1,397,492 sequences; 5,759,798,599 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq791531 109 4e-19 seq599987 109 4e-19 >seq791531 Length=8839 Score = 109 bits (120), Expect = 4e-19 Identities = 135/185 (73%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 61192 CATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAAT 61251 ||||||||| ||||| | || ||||| || ||| || || || || || || || Sbjct 6822 CATTTCATTTCCCATGTTCTAGCTTTCTTCGCTGCTAGTGATGGCATTGTTAACGAAAAC 6881 Query 61252 TTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTC 61311 | | ||| | ||| || || || ||||| | || || | |||||||| |||||| Sbjct 6882 CTGGTTGAAAGGTTCAGTCAAGAAGTTCAAGTAACTGAAGCAAGATGTTTCTATGGCTTC 6941 Query 61312 CAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATC 61371 || ||||| ||||||||||| || || |||||||| ||| ||||||| ||||| ||||| Sbjct 6942 CAAATTGCTATGGAGAATGTGCATTCTGAGATGTATAGTCTTCTCATTGATACATACATT 7001 Query 61372 AGGGA 61376 | ||| Sbjct 7002 AAGGA 7006 >seq599987 Length=38784 Score = 109 bits (120), Expect = 4e-19 Identities = 108/140 (77%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 66050 GTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGA 66109 || ||||||| ||| ||||| || || || ||| | ||| || || | |||||| ||| Sbjct 16959 GTGTACTCGATAATCTCGGTACATAGGTTGCTGGATTTTATTGTACCTAGATTCTGCTGA 17018 Query 66110 TTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGG 66169 || ||| |||||||||||||||||||||| |||||| || ||||| || || ||||| Sbjct 17019 TTGGACTTTCGATTGCATGCATCCTTGTACAGCATGTAAGGTGTGCCAGTTTCCACTTGA 17078 Query 66170 GACTCAATGATGGCGTGCCA 66189 ||||| || || || | ||| Sbjct 17079 GACTCTATAATAGCATACCA 17098 Score = 93.3 bits (102), Expect = 3e-14 Identities = 157/225 (70%), Gaps = 2/225 (1%) Strand=Plus/Plus Query 66245 TAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACAC 66304 ||||| | ||| || ||||||||| || |||| |||| ||||| |||||| Sbjct 25410 TAGAGTTTTTCAAATTCTTCACCCCAACAATCTTGAAGACCAGGACTGTTGTGGGGACAC 25469 Query 66305 ATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGG 66364 || | ||| || ||| |||||||| ||||| |||| ||| || ||||| | Sbjct 25470 ATTAAACTCCACTCTTCATTGGCCTCTACACGCCGCATGAATAAATCTGGAATCCATAAA 25529 Query 66365 GCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCC-GTGATTTTTGCGCAAGTCGAG 66423 || || || | ||| || || || ||||| | || ||| | ||| || ||| || Sbjct 25530 GCATAAAACAAATCACGAGCACGGACTTCCTCTTTCCCCGTGTTCTTTTT-CAGGTCCAG 25588 Query 66424 GAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAA 66468 ||| ||||||| || ||||||||||| |||||||||||||| || Sbjct 25589 GAATTCAAAGACATCTGCATGCCATGGCTCCAGGTAGATGGCAAA 25633 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 390796648162880