Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Locusta_20migratoria_20[genbank_20GCA_5F000516895.1_202013-12-18]
1,397,492 sequences; 5,759,798,599 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq791531 109 4e-19
seq599987 109 4e-19
>seq791531
Length=8839
Score = 109 bits (120), Expect = 4e-19
Identities = 135/185 (73%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 61192 CATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAAT 61251
||||||||| ||||| | || ||||| || ||| || || || || || || ||
Sbjct 6822 CATTTCATTTCCCATGTTCTAGCTTTCTTCGCTGCTAGTGATGGCATTGTTAACGAAAAC 6881
Query 61252 TTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTC 61311
| | ||| | ||| || || || ||||| | || || | |||||||| ||||||
Sbjct 6882 CTGGTTGAAAGGTTCAGTCAAGAAGTTCAAGTAACTGAAGCAAGATGTTTCTATGGCTTC 6941
Query 61312 CAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATC 61371
|| ||||| ||||||||||| || || |||||||| ||| ||||||| ||||| |||||
Sbjct 6942 CAAATTGCTATGGAGAATGTGCATTCTGAGATGTATAGTCTTCTCATTGATACATACATT 7001
Query 61372 AGGGA 61376
| |||
Sbjct 7002 AAGGA 7006
>seq599987
Length=38784
Score = 109 bits (120), Expect = 4e-19
Identities = 108/140 (77%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 66050 GTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGA 66109
|| ||||||| ||| ||||| || || || ||| | ||| || || | |||||| |||
Sbjct 16959 GTGTACTCGATAATCTCGGTACATAGGTTGCTGGATTTTATTGTACCTAGATTCTGCTGA 17018
Query 66110 TTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGG 66169
|| ||| |||||||||||||||||||||| |||||| || ||||| || || |||||
Sbjct 17019 TTGGACTTTCGATTGCATGCATCCTTGTACAGCATGTAAGGTGTGCCAGTTTCCACTTGA 17078
Query 66170 GACTCAATGATGGCGTGCCA 66189
||||| || || || | |||
Sbjct 17079 GACTCTATAATAGCATACCA 17098
Score = 93.3 bits (102), Expect = 3e-14
Identities = 157/225 (70%), Gaps = 2/225 (1%)
Strand=Plus/Plus
Query 66245 TAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACAC 66304
||||| | ||| || ||||||||| || |||| |||| ||||| ||||||
Sbjct 25410 TAGAGTTTTTCAAATTCTTCACCCCAACAATCTTGAAGACCAGGACTGTTGTGGGGACAC 25469
Query 66305 ATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGG 66364
|| | ||| || ||| |||||||| ||||| |||| ||| || ||||| |
Sbjct 25470 ATTAAACTCCACTCTTCATTGGCCTCTACACGCCGCATGAATAAATCTGGAATCCATAAA 25529
Query 66365 GCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCC-GTGATTTTTGCGCAAGTCGAG 66423
|| || || | ||| || || || ||||| | || ||| | ||| || ||| ||
Sbjct 25530 GCATAAAACAAATCACGAGCACGGACTTCCTCTTTCCCCGTGTTCTTTTT-CAGGTCCAG 25588
Query 66424 GAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAA 66468
||| ||||||| || ||||||||||| |||||||||||||| ||
Sbjct 25589 GAATTCAAAGACATCTGCATGCCATGGCTCCAGGTAGATGGCAAA 25633
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 390796648162880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |