Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Loxosceles_20reclusa_20[genbank_20GCA_5F001188405.1_202015-04-27]
143,665 sequences; 3,262,478,678 total letters
Query= NC_011356.1
Length=54896
Score E
Sequences producing significant alignments: (Bits) Value
seq140194 226 1e-54
>seq140194
Length=4052
Score = 226 bits (250), Expect = 1e-54
Identities = 330/470 (70%), Gaps = 31/470 (7%)
Strand=Plus/Plus
Query 6406 TTCGACAATGCGCTCGGCTTCATCCTTGTCATAGATACCAGCAAATCCGAAGGCCAGACG 6465
||| || |||||||| || || |||| |||||||||||| | | |||||||||| ||
Sbjct 2332 TTCTACGATGCGCTCTGCCTCGTCCTGGTCATAGATACCGCCGTACCCGAAGGCCAAGCG 2391
Query 6466 GGCACACTGAATCATGGCTTTATGCCGTAACATCCGTTTGGGATGCGACTGCCACGGTCC 6525
|||||||| ||||||||||| || || | ||| || || ||||| ||||| || ||
Sbjct 2392 TGCACACTGGATCATGGCTTTGTGGCGCAGCATGCGGCGCGGGTGCGATTGCCAGGGGCC 2451
Query 6526 GGTGATTTCTCTGCCTTCGCGGGTTTTGAATGGTTCGCGGCGGCATTCATCCATCCACTC 6585
|| || | ||| | ||| || ||||||||||
Sbjct 2452 CATG---------CCATTGCGCTT------------------GCACTCGGCCATCCACTC 2484
Query 6586 GGTAACGCAGATCGGATGATTACGGTCTTTGCGGTAAATCCGGCATGTACAGGATTCATT 6645
|| || ||| || | || |||||||||||||| || ||| || ||| ||| |
Sbjct 2485 CGTCACTTTGATAGGCCGGTTGCGGTCTTTGCGGTAGATGATGCAGGTGCAGCTTTCGTC 2544
Query 6646 GTCCTGCTCAAAGTCCATGCCATCAAACTGCTGGTTTTCATTGATGATGCGGGACCAGCC 6705
|| ||||||||| || || || || |||||| ||| | ||||||||| || ||||||
Sbjct 2545 GTTCTGCTCAAACTCGATACCGTCGAACTGCGGGTGTGAATTGATGATCCGACTCCAGCC 2604
Query 6706 ATCAACGCCCACCACCGGAACGATGCCGTTCTGCTTATCAGGGAAGGCGTAAATTTCTTT 6765
|| |||||||| || || ||||||||||| | ||| || ||||||||||| ||||| ||
Sbjct 2605 GTCCACGCCCACAACGGGCACGATGCCGTTGTTCTTGTCGGGGAAGGCGTAGATTTCCTT 2664
Query 6766 CGTCCACGGATTAAGGCCGTACTGGTTGGCGACGATCAACAATGCGATGAACTGCGCATC 6825
||||| || || || |||||||||||||||| | || || ||| | | |||||| ||
Sbjct 2665 GGTCCAGGGGTTCAGCGCGTACTGGTTGGCGACCACCAGCAGGGCGGTCATCTGCGCGTC 2724
Query 6826 GCTGGCATCACCTTTAAATGCCGTCTGGC--GAAGAGTGGTGATCAGTTC 6873
||| | | ||||| || |||| |||| ||| ||| |||||| ||
Sbjct 2725 GCTCACCTGGCCTTTGAAGGCCG--TGGCCTTAAGCGTGCCGATCAGGTC 2772
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 175246115366340
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |