Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq1428 313 5e-83 seq1308 102 1e-19 >seq1428 Length=188971 Score = 313 bits (346), Expect = 5e-83 Identities = 220/246 (89%), Gaps = 4/246 (2%) Strand=Plus/Plus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTT-GCTCGAATACATTAGCATGG 132 |||||| ||| |||||||||||||||||||||||| ||| ||||| |||| ||||||||| Sbjct 3598 TTTACTGTGAGAAAATTAGAGTGTTCAAAGCAGGCGTTTCGCTCGTATACGTTAGCATGG 3657 Query 133 AATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTA 192 ||||||||||||||||| | |||||||||||||||||| ||||||||| ||||||||||| Sbjct 3658 AATAATAGAATAGGACGAG-GGTTCTATTTTGTTGGTT-CTAGGACCGTCGTAATGATTA 3715 Query 193 ATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTG 252 |||||||| |||||||| |||||||||| | || ||||||||||||||| |||||| || Sbjct 3716 ATAGGGATGGTCGGGGGCATCAGTATTCAGTAGTAAGAGGTGAAATTCTTTGATTTACTG 3775 Query 253 AAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312 |||||||||| ||||||||||||| ||||||| | ||||||||||| |||||||||| Sbjct 3776 AAGACTAACTGCTGCGAAAGCGTTTGCCAAGGACATCTTCATTAATCA-AGAACGAAAGT 3834 Query 313 TAGGGG 318 |||||| Sbjct 3835 TAGGGG 3840 >seq1308 Length=1706965 Score = 102 bits (112), Expect = 1e-19 Identities = 145/196 (74%), Gaps = 6/196 (3%) Strand=Plus/Minus Query 127 GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTG-TTGGTTTCTAGGACC-GCCGT 184 |||||||||||| |||| ||| | | | ||| ||| ||||||| ||| | | || Sbjct 43223 GCATGGAATAATGAAATAAGACCTCTGTTCCTACTTTCATTGGTTTTTAGATCAAGAGGT 43164 Query 185 AATGATTAATAGGGATAGTC-GGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTG 243 |||||||||||| ||| ||||| | |||||| | |||||||||||| ||| Sbjct 43163 AATGATTAATAGAAGCAGTTTGGGGGCATTAGTATTACGACGCGAGAGGTGAAATTTTTG 43104 Query 244 GATTTATTG-AAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGT 302 | | | | |||||||||| |||||||| || |||| ||||||||||||||||| Sbjct 43103 G-TCCGTCGTAAGACTAACTTAAGCGAAAGCATTTGCCAAAGATGTTTTCATTAATCA-A 43046 Query 303 GAACGAAAGTTAGGGG 318 ||||||||||||| || Sbjct 43045 GAACGAAAGTTAGAGG 43030 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915184322624