Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28]
1,713 sequences; 434,128,924 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq1428 313 5e-83
seq1308 102 1e-19
>seq1428
Length=188971
Score = 313 bits (346), Expect = 5e-83
Identities = 220/246 (89%), Gaps = 4/246 (2%)
Strand=Plus/Plus
Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTT-GCTCGAATACATTAGCATGG 132
|||||| ||| |||||||||||||||||||||||| ||| ||||| |||| |||||||||
Sbjct 3598 TTTACTGTGAGAAAATTAGAGTGTTCAAAGCAGGCGTTTCGCTCGTATACGTTAGCATGG 3657
Query 133 AATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTA 192
||||||||||||||||| | |||||||||||||||||| ||||||||| |||||||||||
Sbjct 3658 AATAATAGAATAGGACGAG-GGTTCTATTTTGTTGGTT-CTAGGACCGTCGTAATGATTA 3715
Query 193 ATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTG 252
|||||||| |||||||| |||||||||| | || ||||||||||||||| |||||| ||
Sbjct 3716 ATAGGGATGGTCGGGGGCATCAGTATTCAGTAGTAAGAGGTGAAATTCTTTGATTTACTG 3775
Query 253 AAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312
|||||||||| ||||||||||||| ||||||| | ||||||||||| ||||||||||
Sbjct 3776 AAGACTAACTGCTGCGAAAGCGTTTGCCAAGGACATCTTCATTAATCA-AGAACGAAAGT 3834
Query 313 TAGGGG 318
||||||
Sbjct 3835 TAGGGG 3840
>seq1308
Length=1706965
Score = 102 bits (112), Expect = 1e-19
Identities = 145/196 (74%), Gaps = 6/196 (3%)
Strand=Plus/Minus
Query 127 GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTG-TTGGTTTCTAGGACC-GCCGT 184
|||||||||||| |||| ||| | | | ||| ||| ||||||| ||| | | ||
Sbjct 43223 GCATGGAATAATGAAATAAGACCTCTGTTCCTACTTTCATTGGTTTTTAGATCAAGAGGT 43164
Query 185 AATGATTAATAGGGATAGTC-GGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTG 243
|||||||||||| ||| ||||| | |||||| | |||||||||||| |||
Sbjct 43163 AATGATTAATAGAAGCAGTTTGGGGGCATTAGTATTACGACGCGAGAGGTGAAATTTTTG 43104
Query 244 GATTTATTG-AAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGT 302
| | | | |||||||||| |||||||| || |||| |||||||||||||||||
Sbjct 43103 G-TCCGTCGTAAGACTAACTTAAGCGAAAGCATTTGCCAAAGATGTTTTCATTAATCA-A 43046
Query 303 GAACGAAAGTTAGGGG 318
||||||||||||| ||
Sbjct 43045 GAACGAAAGTTAGAGG 43030
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915184322624
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |