Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28]
1,713 sequences; 434,128,924 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq1428 255 2e-65
seq1305 102 3e-19
>seq1428
Length=188971
Score = 255 bits (282), Expect = 2e-65
Identities = 225/276 (82%), Gaps = 11/276 (4%)
Strand=Plus/Plus
Query 408 CCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACC 467
||||||||| |||||||||||||||||||| || |||||| |||||||||||||||
Sbjct 5571 CCCGTCTTGAAACACGGACCAAGGAGTCTATTGCCTGCGCGAGTATTTGGGTGTCAAACC 5630
Query 468 CGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATC 527
| | ||| | |||||| || | ||| |||| | || || |||| |||| |
Sbjct 5631 CATATGCGAAGTGAAAGCGA---GTGGTTCGAACTTTTT---GTTCAGAATCGGCCGACC 5684
Query 528 CTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAA 587
| | | | ||||| |||| |||| || || |||||||||||||||||||||
Sbjct 5685 GTT---TATAGAAACGGATT-GAGTT-GAGCGTAAGTGATGGGACCCGAAAGATGGTGAA 5739
Query 588 CTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGC 647
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 5740 CTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGAC 5799
Query 648 GTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||||||||||||||||||||||||||||||||||
Sbjct 5800 GTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 5835
Score = 201 bits (222), Expect = 5e-49
Identities = 140/158 (89%), Gaps = 1/158 (1%)
Strand=Plus/Plus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
||||||||||||||||||||||||||| |||||||||||| | |||||||||||||||
Sbjct 5274 GAGTCGAGTTGTTTGGGAATGCAGCTC-AAATGGGAGGTATGCTCCTTCTAAAGCTAAAT 5332
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
||| || |||||||||||||| ||||||| |||| ||||||||||||| |||||| ||
Sbjct 5333 ATTTGCGAGAGACCGATAGCGAACAAGTACTGTGAAGGAAAGATGAAAAGAACTTTGAAA 5392
Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAG 197
||||||| ||| || ||||||||||||||||| |||||
Sbjct 5393 AGAGAGTGAAATAGGACGTGAAATTGTTGAAATGGAAG 5430
>seq1305
Length=183362
Score = 102 bits (112), Expect = 3e-19
Identities = 115/154 (75%), Gaps = 0/154 (0%)
Strand=Plus/Plus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||| ||| | |||||| |||| |||| ||||| | | |||||| ||||||
Sbjct 135212 GAGTCGTGTTGCTTGATAGTGCAGCACTAAGTGGGTAGTAAACTCCATCTAAAACTAAAT 135271
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
|| | ||||| |||| ||||| | ||| ||||| ||||||| || ||| |
Sbjct 135272 ATAACCATAAGACCTATAGTAAACAAGAACCATGAGGGAAAGTTGAAAAGAACATTGAAT 135331
Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGG 193
||||||||||| || |||||||| || | |||||
Sbjct 135332 AGAGAGTTAAATAGTACGTGAAACTGCTTAAAGG 135365
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079963256150
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |