Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq1428 255 2e-65 seq1305 102 3e-19 >seq1428 Length=188971 Score = 255 bits (282), Expect = 2e-65 Identities = 225/276 (82%), Gaps = 11/276 (4%) Strand=Plus/Plus Query 408 CCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACC 467 ||||||||| |||||||||||||||||||| || |||||| ||||||||||||||| Sbjct 5571 CCCGTCTTGAAACACGGACCAAGGAGTCTATTGCCTGCGCGAGTATTTGGGTGTCAAACC 5630 Query 468 CGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATC 527 | | ||| | |||||| || | ||| |||| | || || |||| |||| | Sbjct 5631 CATATGCGAAGTGAAAGCGA---GTGGTTCGAACTTTTT---GTTCAGAATCGGCCGACC 5684 Query 528 CTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAA 587 | | | | ||||| |||| |||| || || ||||||||||||||||||||| Sbjct 5685 GTT---TATAGAAACGGATT-GAGTT-GAGCGTAAGTGATGGGACCCGAAAGATGGTGAA 5739 Query 588 CTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGC 647 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 5740 CTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGAC 5799 Query 648 GTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||||||||||||||||||||||||||||||||||| Sbjct 5800 GTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 5835 Score = 201 bits (222), Expect = 5e-49 Identities = 140/158 (89%), Gaps = 1/158 (1%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 ||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||| Sbjct 5274 GAGTCGAGTTGTTTGGGAATGCAGCTC-AAATGGGAGGTATGCTCCTTCTAAAGCTAAAT 5332 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 ||| || |||||||||||||| ||||||| |||| ||||||||||||| |||||| || Sbjct 5333 ATTTGCGAGAGACCGATAGCGAACAAGTACTGTGAAGGAAAGATGAAAAGAACTTTGAAA 5392 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAG 197 ||||||| ||| || ||||||||||||||||| ||||| Sbjct 5393 AGAGAGTGAAATAGGACGTGAAATTGTTGAAATGGAAG 5430 >seq1305 Length=183362 Score = 102 bits (112), Expect = 3e-19 Identities = 115/154 (75%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||| | |||||| |||| |||| ||||| | | |||||| |||||| Sbjct 135212 GAGTCGTGTTGCTTGATAGTGCAGCACTAAGTGGGTAGTAAACTCCATCTAAAACTAAAT 135271 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 || | ||||| |||| ||||| | ||| ||||| ||||||| || ||| | Sbjct 135272 ATAACCATAAGACCTATAGTAAACAAGAACCATGAGGGAAAGTTGAAAAGAACATTGAAT 135331 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGG 193 ||||||||||| || |||||||| || | ||||| Sbjct 135332 AGAGAGTTAAATAGTACGTGAAACTGCTTAAAGG 135365 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079963256150