Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq1428 178 2e-42 >seq1428 Length=188971 Score = 178 bits (196), Expect = 2e-42 Identities = 189/244 (77%), Gaps = 9/244 (4%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 4338 ACTCGCTGGCTGCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 4279 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||| ||| ||| | | | || ||||||| ||||| |||| | Sbjct 4278 CCTGTTATTGCCTCGAACCTCCCCCGAATTGTCTCCGGTAGTCCCGCTAAG-AGCCGGGT 4220 Query 122 ACCAACCATAGTCGATGGGGC----TATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAA 177 | | || ||| || | | | |||| || |||||||| ||||||||| || Sbjct 4219 GCTCA-CAAAGT--GTGAGTCCCAGCAACTAGC-GGCCGAGGTCTCGCTCGTTATCGCAA 4164 Query 178 TTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCA 237 | || ||||||| | || ||| |||||||||||||||||||||||||||| | ||||| Sbjct 4163 TAAAGCAGACAACTTACGTCACGAACTAAGAACGGCCATGCACCACCACCCTTCTAATCA 4104 Query 238 AGAA 241 ||| Sbjct 4103 TGAA 4100 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796786777353