Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= AAMG01001188.1 Length=621 Score E Sequences producing significant alignments: (Bits) Value seq1596 302 2e-79 >seq1596 Length=248270 Score = 302 bits (334), Expect = 2e-79 Identities = 428/591 (72%), Gaps = 8/591 (1%) Strand=Plus/Plus Query 14 GCACGGGAAGTGGCCTTGCTTTGGCTTTTCGAGGCGTTCGCCGAGAAACGGCTTGACGAA 73 || || ||||| || ||| ||||| |||| || ||||| || ||| ||||| ||||| Sbjct 187062 GCGCGAGAAGTCGC-TTG-TTTGGATTTT-GATGCGTTAGCACTGAAGCGGCTA-ACGAA 187117 Query 74 GGATTTGCAGCTCGGTGATCTGCGCCTTCTTTCTTGGCGTTGTCCGACAGCAGTTGCTCG 133 |||| | | ||| | || ||||| || |||||| || || || || | || |||| Sbjct 187118 AGATT-GTAACTCCGCAATTTGCGCTTT-TTTCTTCGCATTATCGGATAAAAGGCGCTCT 187175 Query 134 CGGGACTGGGTCGCCACGGTCATGTACTCGTCGTAGTTGCCCGGGAACAGGCGCAGCTCG 193 | | || || ||| | |||| ||||| || ||||| |||||||| | |||| ||| Sbjct 187176 CTCGCTTGAGTTGCCGCAATCATATACTCATCATAGTTACCCGGGAATAAACGCAACTCA 187235 Query 194 CCGTAGTCCAGGTCAGCCATGTGGGTACACACGCTGTTCAGGAAGTGACGGTCGTGAGAG 253 ||||| || | ||| ||||| || ||||| ||| |||| | ||||| | || || || Sbjct 187236 CCGTAATCTAAGTCCGCCATATGCGTACAAACGGTGTTTAAAAAGTGTCTATCATGGGAA 187295 Query 254 ATGATGATCATCAGGCTGGAACGCTGGGTCAGGATATTTTCCAGCCAGCGGATGGTGTTG 313 ||||||| ||| || | ||| | ||| || | ||| | ||| ||||| |||| | Sbjct 187296 ATGATGACCATGGTGCAGTTACGATCATTCAAGACTTGTTCTAACCAACGGATTGTGTCG 187355 Query 314 ATGTCCAAGTGGTTGGTCGGTTCGTCGAGCAACAGCACTTCAGGATCGGAAAACAGCGCC 373 || ||||||| ||| || ||||| || || |||| | |||||||| | |||||||||| Sbjct 187356 ATATCCAAGTTGTTAGTTGGTTCATCAAGTAACAAAATATCAGGATCCGCAAACAGCGCC 187415 Query 374 TGGGCCAGCAATACACGCAGCTTCCAGCCCGGGGACACTTCGCTCATCGGACCGAAGTGC 433 || ||||||| ||||| | |||||| ||||| | ||||||||||||||||| | || Sbjct 187416 TGAGCCAGCAGCACACGTAACTTCCAACCCGGAGCAACTTCGCTCATCGGACCATAATGT 187475 Query 434 TGCTCCAGCGGAATACCCAGACCCAGCAGCAGCTCACCGGCACGGGATTCGGCGGTGTAG 493 ||||| | ||||||||| | ||| || | ||||||||| ||||||| ||| ||| | ||| Sbjct 187476 TGCTCAACCGGAATACCAACACCTAGTAACAGCTCACCAGCACGGGCTTCCGCGCTATAG 187535 Query 494 CCGTCCATCTCGGCGAACTCGGTTTCCAGCTCGGCCACGGCCAT-GCCGTCTTCTTCGCT 552 || ||||| || | | | |||||| || || || | || ||| ||||||||||| Sbjct 187536 CCATCCATTTCACCATAAGCCACTTCCAGATCAGCAAC-ACGATAGCCATCTTCTTCGCT 187594 Query 553 CATTTCCGGCAGCGAGTAAATACCATCACGCTCGGCCTTGACCTTCCACAG 603 |||||| |||| | ||||| | || ||||| ||||| | ||| || Sbjct 187595 CATTTCTGGCATTGCATAAATTCTGTCGCGCTCTTGTTTGACATCCCAAAG 187645 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1881566760948