Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= AAMG01001690.1 Length=455 Score E Sequences producing significant alignments: (Bits) Value seq87 138 3e-30 >seq87 Length=489008 Score = 138 bits (152), Expect = 3e-30 Identities = 294/434 (68%), Gaps = 24/434 (6%) Strand=Plus/Minus Query 9 AACACTTCACGGGCACCGGCGCCAAGGGCCGATTCACGGATGGCACGACGCTCCACCTGG 68 || ||||| || ||||| |||| || || ||||||||||| || ||| || || || Sbjct 239730 AAGACTTCGCGTGCACCTGCGCTCAGTGCAGATTCACGGATTGCTTTACGTTCAACTTGT 239671 Query 69 GTGGACTTGCAC-----GGAACGCAGATCAGCACACGAGGGCTGGGCTGCAGGAAACTGT 123 | |||||| || || || | |||||||| ||||| || | || || |||| Sbjct 239670 G-----TTGCACCAACTGGCACACAAACTAGCACACGTGGGCTTGGACGAAGAAAGCTGT 239616 Query 124 TTTCGTGAACCTTGTTGATGAAGTACTGCAGCATCTTCTCGCAGACGCTGAAGTCGGCGA 183 | || |||| ||||| || | ||| ||||| || || | | || || || | Sbjct 239615 TGCTATGCACCTGTTTGATAAAATGCTGTAGCATTTTTTCCGTAAGGAAAAAATCTGCAA 239556 Query 184 TCACGCCGTCTTTCATCGGACGAATGGCAGCAATATTGCCTGGTGTACGGCCGAGCATGC 243 | || || |||||||| || | || || | |||||| || |||||||| || ||||| Sbjct 239555 TAACCCCATCTTTCATTGGTCTTATTGCTGAAATATTACCCGGTGTACGCCCCAGCATTT 239496 Query 244 GCTTGGCCTCGGTGCCGACGGCAACGACACTTTTCTGATTACC--ATGGGTC----CGAA 297 |||| || || || || ||| | || ||||| | |||| | |||| |||| Sbjct 239495 GCTTAGCTTCACCACCCACCGCAGCAACGCTTTTTGGTGTACCAGAACGGTCTTGGCGAA 239436 Query 298 TGGCCACAACCGATGGCTCATTCAGGACGATACCGCGCTCGCGC----ACGTAAATAAGG 353 | || ||||| || || ||||| | | || ||| || | | || ||||| ||| Sbjct 239435 TAGCGACAACAGAAGGTTCATTTA--ATTTTA-CGC-CTTGTCCTTTGACATAAATGAGG 239380 Query 354 GTGTTGGCAGTGCCCAGGTCAATGGAAAGATCGCTGGAAAACATGCCACGCAGTTTCTTG 413 || ||||| || |||| |||||| || || || | |||||||||||||| | ||| || Sbjct 239379 GTATTGGCCGTACCCAAGTCAATTGACAGGTCATTAGAAAACATGCCACGAAATTTTTTA 239320 Query 414 AACATGGGGAAAGG 427 ||||| |||||| Sbjct 239319 AACATAACGAAAGG 239306 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1353576812832