Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28]
1,713 sequences; 434,128,924 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq1428 297 6e-78
seq738 113 1e-22
>seq1428
Length=188971
Score = 297 bits (328), Expect = 6e-78
Identities = 253/310 (82%), Gaps = 13/310 (4%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct 297 CTTTTGCTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACATCTGCGTTATC 238
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
|||||||||||||||||||||||||||||||||||||||||||||| || || ||
Sbjct 237 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTCCAGCCTGG--- 181
Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186
| || |||||| |||| || |||| | | ||| | || ||| | ||
Sbjct 180 GTTCCCCGAAGG--GTTAAAGCTAGAATACACT-----TAGAGTGCTCCCACTTAACTGG 128
Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246
|||||||| ||||||||||||||| ||||||||||| |||||| | |||||| ||||
Sbjct 127 ATAAGTAAAGAAACGATAAGGGTAGAGGTATTTCACTGGCGCCGGA---GCTCCCTCTTA 71
Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306
||||||||| | | ||| ||||||| ||| |||||||||||||||||||||||||||
Sbjct 70 TTCTACACCCCCTATGTCTCTTCACAAGGTCAAACTAGAGTCAAGCTCAACAGGGTCTTC 11
Query 307 TTTCCCCGCT 316
||||||||||
Sbjct 10 TTTCCCCGCT 1
Score = 277 bits (306), Expect = 6e-72
Identities = 161/165 (98%), Gaps = 1/165 (1%)
Strand=Plus/Minus
Query 376 GGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCT 435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 7212 GGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCT 7153
Query 436 TAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGA 495
||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||
Sbjct 7152 TAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTAGTTGAATTTCTTCCCTTTGA 7093
Query 496 CATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTT 540
|||||||||||||||||||||||||||||| ||||||||| ||||
Sbjct 7092 CATTCAGAGCACTGGGCAGAAATCACATTGTGTCAACATC-CTTT 7049
>seq738
Length=465443
Score = 113 bits (124), Expect = 1e-22
Identities = 90/110 (82%), Gaps = 9/110 (8%)
Strand=Plus/Minus
Query 289 AAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGT 348
|| || ||||| |||||||||||||||| ||| ||||||||||||||||| |||||||
Sbjct 280122 AATCTTAACAGAGTCTTCTTTCCCCGCTAATTATTCCAAGCCCGTTCCCTTGACTGTGGT 280063
Query 349 TTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATG 398
|||| |||||| ||||| |||||||||||||||||||||||
Sbjct 280062 TTCGGTAGATA---------GACAGCAGGAATCTCGTTAATCCATTCATG 280022
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635171989024
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |