Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq1428 297 6e-78 seq738 113 1e-22 >seq1428 Length=188971 Score = 297 bits (328), Expect = 6e-78 Identities = 253/310 (82%), Gaps = 13/310 (4%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||||||||| |||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct 297 CTTTTGCTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACATCTGCGTTATC 238 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||||||||||||| || || || Sbjct 237 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTCCAGCCTGG--- 181 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 | || |||||| |||| || |||| | | ||| | || ||| | || Sbjct 180 GTTCCCCGAAGG--GTTAAAGCTAGAATACACT-----TAGAGTGCTCCCACTTAACTGG 128 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 |||||||| ||||||||||||||| ||||||||||| |||||| | |||||| |||| Sbjct 127 ATAAGTAAAGAAACGATAAGGGTAGAGGTATTTCACTGGCGCCGGA---GCTCCCTCTTA 71 Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306 ||||||||| | | ||| ||||||| ||| ||||||||||||||||||||||||||| Sbjct 70 TTCTACACCCCCTATGTCTCTTCACAAGGTCAAACTAGAGTCAAGCTCAACAGGGTCTTC 11 Query 307 TTTCCCCGCT 316 |||||||||| Sbjct 10 TTTCCCCGCT 1 Score = 277 bits (306), Expect = 6e-72 Identities = 161/165 (98%), Gaps = 1/165 (1%) Strand=Plus/Minus Query 376 GGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCT 435 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7212 GGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCT 7153 Query 436 TAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGA 495 ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| Sbjct 7152 TAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTAGTTGAATTTCTTCCCTTTGA 7093 Query 496 CATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTT 540 |||||||||||||||||||||||||||||| ||||||||| |||| Sbjct 7092 CATTCAGAGCACTGGGCAGAAATCACATTGTGTCAACATC-CTTT 7049 >seq738 Length=465443 Score = 113 bits (124), Expect = 1e-22 Identities = 90/110 (82%), Gaps = 9/110 (8%) Strand=Plus/Minus Query 289 AAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGT 348 || || ||||| |||||||||||||||| ||| ||||||||||||||||| ||||||| Sbjct 280122 AATCTTAACAGAGTCTTCTTTCCCCGCTAATTATTCCAAGCCCGTTCCCTTGACTGTGGT 280063 Query 349 TTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATG 398 |||| |||||| ||||| ||||||||||||||||||||||| Sbjct 280062 TTCGGTAGATA---------GACAGCAGGAATCTCGTTAATCCATTCATG 280022 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635171989024