Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq1428 551 2e-154 seq2 132 1e-28 >seq1428 Length=188971 Score = 551 bits (610), Expect = 2e-154 Identities = 377/419 (90%), Gaps = 22/419 (5%) Strand=Plus/Minus Query 86 CGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGA 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 11735 CGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGA 11676 Query 146 ACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTT 205 |||||||||||||||||||||||| |||||||||||||||||| | |||||||||||||| Sbjct 11675 ACCCTAATTCCCCGTTACCCGTTGCTACCATGGTAGGCCACTACCGTACCATCGAAAGTT 11616 Query 206 GATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTA 265 |||||||||||||||||||||||||| |||| || || |||||||| |||| |||||| Sbjct 11615 GATAGGGCAGAAATTTGAATGAACCAGCGCCAGC-AAAAGCCATGCGCTTCGACAAGTTA 11557 Query 266 TTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCCTT 325 | ||||||||||||| | | ||||| ||||||||||||||||||| | | Sbjct 11556 TCATGAATCACCAAG---------ACGAGGTTGG-TTTTTATCTAATAAATACAAC---T 11510 Query 326 CCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTA 385 ||||| | ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 11509 CCGAA----GAGTTTTGTGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTA 11454 Query 386 AGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGA 445 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 11453 --GTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAG- 11397 Query 446 TTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||| Sbjct 11396 TTGCTTATACTTAGACATGCATGGCTTAATCTTTGATACAAGCATAT-ATTACTGGCAG 11339 Score = 452 bits (500), Expect = 1e-124 Identities = 325/370 (88%), Gaps = 21/370 (6%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 || |||||||| ||||||||||| |||| |||||||||| |||||||||||||||||| Sbjct 3384 GTTCTCATTCCGATTACAAGACC--AAAG-GCCCTGTATCGTTATTTATTGTCACTACCT 3328 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3327 CCCTGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 3268 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 3267 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGCTACCATGGTA 3208 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||||||| | |||||||||||||||||||||||||||||||||||||||| |||| || Sbjct 3207 GGCCACTACCGTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCAGCGCCAGC- 3149 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 || |||||||| |||| ||||||| ||||||||||||| | | ||||| Sbjct 3148 AAAAGCCATGCGCTTCGACAAGTTATCATGAATCACCAAG---------ACGAGGTTGG- 3099 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360 ||||||||||||||||||| | |||||| | ||||| ||||||||||||||||| Sbjct 3098 TTTTTATCTAATAAATACAAC---TCCGAA----GAGTTTTGTGCATGTATTAGCTCTAG 3046 Query 361 AATTACCACG 370 |||||||||| Sbjct 3045 AATTACCACG 3036 >seq2 Length=2009150 Score = 132 bits (146), Expect = 1e-28 Identities = 109/132 (83%), Gaps = 2/132 (2%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAA--GAGCCCTGTATCAGTATTTATTGTCACTAC 58 |||||||||||||||||| | | | || ||| ||||||| ||||| | |||||||| Sbjct 39651 GTACTCATTCCAATTACAGGCCTCTAATATGAGTCCTGTATTGTTATTTTTCGTCACTAC 39710 Query 59 CTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCG 118 ||||||| || | |||||||||| ||||||||||||||||||| ||| ||||||||| Sbjct 39711 CTCCCCGAAATGGAAGTGGGTAATTTACGCGCCTGCTGCCTTCCTTAGATTTGGTAGCCG 39770 Query 119 TTTCTCAGGCTC 130 ||||||||| || Sbjct 39771 TTTCTCAGGTTC 39782 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510374126848