Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28]
1,713 sequences; 434,128,924 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq1428 551 2e-154
seq2 132 1e-28
>seq1428
Length=188971
Score = 551 bits (610), Expect = 2e-154
Identities = 377/419 (90%), Gaps = 22/419 (5%)
Strand=Plus/Minus
Query 86 CGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGA 145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 11735 CGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGA 11676
Query 146 ACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTT 205
|||||||||||||||||||||||| |||||||||||||||||| | ||||||||||||||
Sbjct 11675 ACCCTAATTCCCCGTTACCCGTTGCTACCATGGTAGGCCACTACCGTACCATCGAAAGTT 11616
Query 206 GATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTA 265
|||||||||||||||||||||||||| |||| || || |||||||| |||| ||||||
Sbjct 11615 GATAGGGCAGAAATTTGAATGAACCAGCGCCAGC-AAAAGCCATGCGCTTCGACAAGTTA 11557
Query 266 TTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCCTT 325
| ||||||||||||| | | ||||| ||||||||||||||||||| | |
Sbjct 11556 TCATGAATCACCAAG---------ACGAGGTTGG-TTTTTATCTAATAAATACAAC---T 11510
Query 326 CCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTA 385
||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 11509 CCGAA----GAGTTTTGTGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTA 11454
Query 386 AGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGA 445
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 11453 --GTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAG- 11397
Query 446 TTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
|||||||||||||||||||||||||||||||||||| |||||||||| | |||||||||
Sbjct 11396 TTGCTTATACTTAGACATGCATGGCTTAATCTTTGATACAAGCATAT-ATTACTGGCAG 11339
Score = 452 bits (500), Expect = 1e-124
Identities = 325/370 (88%), Gaps = 21/370 (6%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
|| |||||||| ||||||||||| |||| |||||||||| ||||||||||||||||||
Sbjct 3384 GTTCTCATTCCGATTACAAGACC--AAAG-GCCCTGTATCGTTATTTATTGTCACTACCT 3328
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3327 CCCTGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 3268
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 3267 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGCTACCATGGTA 3208
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
|||||||| | |||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct 3207 GGCCACTACCGTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCAGCGCCAGC- 3149
Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300
|| |||||||| |||| ||||||| ||||||||||||| | | |||||
Sbjct 3148 AAAAGCCATGCGCTTCGACAAGTTATCATGAATCACCAAG---------ACGAGGTTGG- 3099
Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360
||||||||||||||||||| | |||||| | ||||| |||||||||||||||||
Sbjct 3098 TTTTTATCTAATAAATACAAC---TCCGAA----GAGTTTTGTGCATGTATTAGCTCTAG 3046
Query 361 AATTACCACG 370
||||||||||
Sbjct 3045 AATTACCACG 3036
>seq2
Length=2009150
Score = 132 bits (146), Expect = 1e-28
Identities = 109/132 (83%), Gaps = 2/132 (2%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAA--GAGCCCTGTATCAGTATTTATTGTCACTAC 58
|||||||||||||||||| | | | || ||| ||||||| ||||| | ||||||||
Sbjct 39651 GTACTCATTCCAATTACAGGCCTCTAATATGAGTCCTGTATTGTTATTTTTCGTCACTAC 39710
Query 59 CTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCG 118
||||||| || | |||||||||| ||||||||||||||||||| ||| |||||||||
Sbjct 39711 CTCCCCGAAATGGAAGTGGGTAATTTACGCGCCTGCTGCCTTCCTTAGATTTGGTAGCCG 39770
Query 119 TTTCTCAGGCTC 130
||||||||| ||
Sbjct 39771 TTTCTCAGGTTC 39782
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510374126848
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |