Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq1348 493 1e-134 seq869 396 2e-105 seq583 118 8e-22 >seq1348 Length=1847788 Score = 493 bits (546), Expect = 1e-134 Identities = 1166/1756 (66%), Gaps = 29/1756 (2%) Strand=Plus/Plus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 ||| || || || || || ||||| || || | || || || | ||| ||||||||||| Sbjct 1698161 ATCTACGGTAAATTGAATAGCATTGGCGGCTGGTTTTGTTCTCAAATAATACATGCCGGT 1698220 Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTC 65196 ||| | ||| | ||| ||||||||||| || || | ||||| | ||||| ||||| Sbjct 1698221 CTTTAAGCCTGATTTCCAGGCATAGAAATGTATGGAGGTCAATTTGCCGTAATTTGGCTC 1698280 Query 65197 GGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCAT 65256 ||||||||| ||||| ||||| ||||| ||||| ||| || ||||| || |||||||| Sbjct 1698281 GGCCACATGTATATTGAACGATTGACTTTGATCTATGAAAGCGCCACGGTCGGCAGCCAT 1698340 Query 65257 GTCAATGATACGACGTCCCG-ATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCAA 65315 | ||| | | | | || | |||||||| || || ||||| || ||||| | Sbjct 1698341 TTGTATGGTG-GTCTTAACGGAAATCTCCCAAACTGTTTTGTATAGATCACGTATATGTT 1698399 Query 65316 TTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATCG 65375 | || || || || ||| | || | || || ||| | |||||| ||| ||| Sbjct 1698400 TGGGTATTTCTTCTATGGCTTGTATGGAGCCGCGATTGGAAATAATTTTATTTTTCATTT 1698459 Query 65376 ACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTTGGA 65435 || ||| ||| | | ||| | | || || || ||| ||| |||||| || | || Sbjct 1698460 CATCATCCCATAAATCAAGTTCGGTTAAATCTTTAAGCAAATGATGATTGACAACATTGA 1698519 Query 65436 ACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCAG 65495 | || || |||| ||||| | || || || || ||| ||||||||||||||| Sbjct 1698520 ATTCTCCCGACAAAACACGTCTAGTGTAAATATTAGAGGTGTACGGTTCAAAGGATTCAT 1698579 Query 65496 TGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTTC 65555 |||||||||||||||| || || || || || ||||| || || | | ||| || || | Sbjct 1698580 TGTTGCCTAGAATTTGTGCGGTCGAAGCTGTGGGCATTGGGGCTAATAGCAAAGAATTGC 1698639 Query 65556 GCAATCC--GTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTTTATC 65613 | | || ||| | | || || | ||| || ||||||||||| || | | Sbjct 1698640 GTACACCATGTTGACTG--ATTTTCTCCTTCAACTCTGACCAGTTCCACAA--GTCTGTG 1698695 Query 65614 GTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACCGAG 65673 | | | | |||||||| | ||| || | || |||| | || | ||| | Sbjct 1698696 GGTGTTTTATTC----CACATATCATATTGTAGTATACCCTTACTTACTGGACAGCCGGG 1698751 Query 65674 GAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGCAAA 65733 || | || || || || | | ||| | || ||| || | || | ||| || | Sbjct 1698752 ATAAGTTTCATATGTGCCATCTTTTTCGGCCAATTCACAACTAGCTTCCAAAGCGCCATA 1698811 Query 65734 ATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGCAT 65793 |||||| || |||||||| || |||| | | ||||| || ||||| || || Sbjct 1698812 ATAAATAGTTTCGAAAATCTGTTGATTTAACAAAAATGCCTTTTCACTCTCATAGGGGTA 1698871 Query 65794 ACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACG 65853 || ||| | | ||||| ||||| | ||| ||||| || ||||| || ||||||||||| Sbjct 1698872 ACGCATTAAAATCAAAGTATCGGCAAAACCCTGAACACCTATACCAATAGGACGATGACG 1698931 Query 65854 CAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCAA 65913 ||||||||| ||| || || || | || || | ||||| ||||| || || | Sbjct 1698932 CAAATTGGACTTTCTAGCTTCGGGCAACGGATAAAAGTTGATGTCGATGATTTTGTTGAG 1698991 Query 65914 ATTGCGTGTCACCACATGCACGATACGTCGCAATTGTTCGAAATCAAAA-TGTTTAGGAC 65972 ||| || | || | | | | ||||| || ||||||||| | ||| Sbjct 1698992 ATTCTTGGTAATAACTTTTGTAACATTTTTCAATTTTTTGAAATCAAAGGTCTTT----- 1699046 Query 65973 GATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAG 66032 || || ||| |||||| | |||||||| || || | || || |||| Sbjct 1699047 --TCTGGCGTG---------ACAAACATATTAAGGGCAATGGAGGCCAAATTACAAACAG 1699095 Query 66033 CTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGG 66092 ||||||| ||||| || | ||| || ||||| || ||||| | || ||||| |||| Sbjct 1699096 CTATCTCATCAGGGGCAGAATATTCTACAATCTCTGTGCATAAGTTGCTGCACTTAATGG 1699155 Query 66093 TGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAG 66152 |||| | || || || || || ||||| ||||| ||||| ||||||| ||| || || | Sbjct 1699156 TGCCAATGTTTTGCTGGTTGCTTTTGCGGTTGCAAGCATCTTTGTACAACATATAGGGTG 1699215 Query 66153 TGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTAC 66212 | ||||| |||||||| | ||||| || || ||||||||| | || || || || | Sbjct 1699216 TACCGGTTTCAACTTGAGCTTCAATTATAGCAAACCAAAGAGCCTGAGCTTTGACGGTGC 1699275 Query 66213 GTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATA 66272 | || | |||| ||| || | || | | |||||| |||||||| | Sbjct 1699276 GATTGGCTTTTCCTTCTTTTTCATACTTGGTATACAATTCTTCGAACTCCTCACCCCAAA 1699335 Query 66273 CTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTA 66332 | || ||||| ||||| |||||||||||||| || ||||| ||||||| | ||| | Sbjct 1699336 CATCCTGCAGACCGGGACATTTGTGTGGACACATTAGGGACCAGTCACCATTTTCTTCCA 1699395 Query 66333 CACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCT 66392 |||| |||||| | || |||||||| || || ||||| ||||| | |||| |||| Sbjct 1699396 CACGTTTCATAAACAAGTCGGGTATCCACAGAGCATAGAAAAGATCTCTGGCTCTATGCT 1699455 Query 66393 CCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTT 66452 | || ||||| |||||| || || | || ||||| || || | |||||| || | Sbjct 1699456 CTTCCTTGCCGGTATTTTTCTTTAAATCCAAAAATTCAAAAATATCTGAATGCCAAGGCT 1699515 Query 66453 CCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGA 66512 ||| || || || || | || |||||||| ||||| || || || ||||| || | Sbjct 1699516 CCAAATAAATAGCAAAGGCACCAGGGCGTTTGCCACCACCCTGATCAACATAGCGGGCTA 1699575 Query 66513 CATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGA 66572 ||||||| || || | | ||| ||||| || || || || |||| || |||||||| | Sbjct 1699576 CATTGTTAAACACCCTGAGCATTGGTACCAGACCATTTGAGGTGCCGTTTGTGCCGTCAA 1699635 Query 66573 TGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCG 66632 ||| | || |||| ||| ||| || || | ||||||||||| |||| || | Sbjct 1699636 TGGAAGTGCCCTTGGCCCTTATGCAGTGTACGTTTATGCCAATACCACCCGCCGATTTGG 1699695 Query 66633 AGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGG 66692 | || ||||| | |||||| | ||| || || ||||| || || || |||| Sbjct 1699696 ATATCATGGCACATTGTTCCACTGACTTGAAAATACCCTCAATAGAATCGGCCACCATGG 1699755 Query 66693 TCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTG 66752 ||| | | | || || | || ||| | || || |||| ||| | || || | Sbjct 1699756 TCAATAAGAAACACGACGACAACTGCGGTCTATTGGTAGCAGCCGCGAACAATGTAGGCG 1699815 Query 66753 TAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGT 66812 || || ||||| ||| | ||||| |||| || || || || | | |||||| | Sbjct 1699816 ACGCATGGGTAAAATAACGCTCAGACAACAAATTATAAGTTTCAATAGCCGAATCAATAT 1699875 Query 66813 TTTCGCCATGAATCCC 66828 || ||||| || || Sbjct 1699876 CGTCTCCATGTATACC 1699891 >seq869 Length=1271022 Score = 396 bits (438), Expect = 2e-105 Identities = 527/727 (72%), Gaps = 9/727 (1%) Strand=Plus/Plus Query 61105 AAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGAC 61164 ||||| |||||||| || |||||||| || || || ||| | || ||||| | ||| Sbjct 483438 AAGGCCGAAGCTTCTTTTTGGACGGTAGAAGAAGTAGATCTTTCTAAAGATAACTCCGAC 483497 Query 61165 TGGGAGCGTTT-ATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGC 61223 ||||| | | | ||| | ||| | ||||||||| |||||| | || ||||| || Sbjct 483498 TGGGAAAGACTCACCGA-CAATGAGCGTCATTTCATTTCACATGTTCTTGCTTTCTTCGC 483556 Query 61224 CGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGT 61283 |||||| || || || |||||||| ||| | | ||||||||| | || || || ||||| Sbjct 483557 CGCTTCCGATGGCATTGTCAATGAAAATCTTGTCGAACGTTTCTCTCAAGAAGTACAAGT 483616 Query 61284 GTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGAT 61343 | ||||| || |||||||| ||||| || ||||||||||| ||||| ||||| || || Sbjct 483617 TACAGAGGCACGCTGTTTCTATGGCTTTCAAATTGCCATGGAAAATGTACACTCTGAAAT 483676 Query 61344 GTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAA 61403 ||| ||| |||| || |||| || || | ||| || | | ||||| | || || Sbjct 483677 GTATAGTATTCTAATTGATAGTTATATTAAGGATCGTGAACAGCGTGATTATCTCTTTAA 483736 Query 61404 TGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCAC 61463 ||| || || || || || || || ||||| || || |||||||| | |||||| | Sbjct 483737 TGCTATTGAAACTATGCCAGCTGTTAAGCGTAAGGCCGATTGGGCAATGGCTTGGATTTC 483796 Query 61464 CAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATT 61523 | | | || | ||||||||||| | | || ||||| | || |||||| | || Sbjct 483797 TTCGAAATCAGCAAATTTTGGTGAACGTATTATTGCTTTTGCTGCTGTAGAGGGTATTTT 483856 Query 61524 TTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCT 61583 || ||||| ||||| | ||||||||| | ||||||||||| |||||||| ||||| Sbjct 483857 CTTTAGTGGCAGTTTTGCTTCCATCTTTTGGCTAAAGAAACGTGGTCTTATGCCTGGTCT 483916 Query 61584 GACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTTTT 61643 || ||| |||||||||||||||||| || ||||| | ||||||||||||||||| || Sbjct 483917 TACATTCTCCAATGAGTTGATATCACGTGATGAGGGTTTACATTGTGATTTTGCTGTATT 483976 Query 61644 GCTATTCAAACGCTATCTGGTGAATCGTCC--GTCGGAGGAGCGTGTGGGTGAGATTGTT 61701 | || |||| || |||| | ||||| |||| ||| | | ||| ||| | Sbjct 483977 AATGTTTAAAC---ATTTGGTACAACGTCCCAGTCG--AGAGAGAATTATTGAAATTATC 484031 Query 61702 CGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCATC 61761 ||| ||||| | || ||||||||||| || || || |||||||||||| | || Sbjct 484032 ACTGAAGCGGTGAAAATTGAACAGGAATTCCTTACAGATGCTTTGCCCGTCAATTTGATA 484091 Query 61762 GGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTC 61821 |||||||||||| | |||||||| | ||||| |||||||| ||||| ||| || |||| Sbjct 484092 GGCATGAATTGTAAATTAATGTCGGAATATATAGAATTTGTGGCCGATCGTTTGCTGGTG 484151 Query 61822 GATTTGG 61828 || |||| Sbjct 484152 GAATTGG 484158 >seq583 Length=2816 Score = 118 bits (130), Expect = 8e-22 Identities = 290/429 (68%), Gaps = 17/429 (4%) Strand=Plus/Plus Query 61510 GTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGA 61569 ||||||||||| || |||||||| || || || || || || ||||||||||| ||||| Sbjct 195 GTCGAGGGTGTCTTCTTCAGTGGTTCATTCGCTGCCATTTTCTGGTTGAAGAAGCGTGGC 254 Query 61570 CTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGT 61629 | ||||| ||| | || ||||| |||||| | || || | || ||||| ||||| | Sbjct 255 TTGATGCCTGGTTTAACATTCAGTAATGAGCTTATTTCCAGAGATGAGGGTATGCACACT 314 Query 61630 GATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCC--GTCG-GAGGAGCGT 61686 ||||| ||| | | || ||| | || | | ||| ||||| |||| ||| | Sbjct 315 GATTTCGCTTGTCTTCTCTTCTCTCACT---TAGAGAACCGTCCCAGTCGTGAGATTATT 371 Query 61687 GTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGA--ATTTCTGACTGACGCTT 61744 | | || ||| | ||||| || ||| ||||| || | ||| | ||| |||| Sbjct 372 GAGCGT---ATTATGACCGAGGCTGTTGATATTGAACAAGAGTACTTCCG--TGATGCTT 426 Query 61745 TGCCCGTCTCAC-TCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTT 61803 |||| || |||| | | || |||||| || | ||| ||||| |||| | || Sbjct 427 TGCCTGT-TCACTTGCTTGGTATGAATGCTGATTTGATGAATCAGTACGTTGAGTACGTA 485 Query 61804 GCCGACCGTCTGTTGGTCGATTTGGG-TATGAAGCGGATCTATAATACGAAAAACCCATT 61862 || |||||| | |||| | ||||| ||| || ||| || || || || || Sbjct 486 GCTGACCGTTTAATGGTTGCCTTGGGCCATG-AGAAGATTTACAAGGTTGCCAATCCCTT 544 Query 61863 TGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGG 61922 ||||||||||| | || || ||| ||| ||||| || || || ||||| ||||| | Sbjct 545 CGATTTCATGGAGAATATCTCTTTGGCTGGTAAGACTAACTTCTTTGAGAAGCGTGTTAG 604 Query 61923 CGACTATCA 61931 ||||| || Sbjct 605 TGACTACCA 613 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397559699898320