Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_031918.1 Length=45342 Score E Sequences producing significant alignments: (Bits) Value seq165 143 8e-30 >seq165 Length=448888 Score = 143 bits (158), Expect = 8e-30 Identities = 181/249 (73%), Gaps = 0/249 (0%) Strand=Plus/Plus Query 33681 ACCTTCAAAATAAACTTGTGAGCCTTTCCTAAGATACTCACCAGCAATTTCAGCGAGCTT 33740 |||||||| ||||||||||||||||| | ||||| || || |||| |||||| | || Sbjct 55547 ACCTTCAATGTAAACTTGTGAGCCTTTTTTCAGATATTCGCCCGCAACTTCAGCTAATTT 55606 Query 33741 GCCAAAGATAACTACGCGGTGCCATTCAGTTTGCTCCTTTTTCTCACCAGTAGCCTTATC 33800 || || || ||||| ||||||||||| |||| || | ||||| || |||||| Sbjct 55607 TCCGAAAATCACTACACGGTGCCATTCGGTTTTTTCACGCATTTCACCGGTTTGCTTATC 55666 Query 33801 ATTCCATGATTCCGATGTAGCAACAGATACGTTGGCAACAGCGCCGCCATTTGGCATGTA 33860 ||| ||| || || || | || || ||| || ||||| ||||| || |||||||| Sbjct 55667 GCGCCAGCTTTCAGAAGTTGCCAGAGTTAGGTTTGCCACAGCACCGCCGTTAGGCATGTA 55726 Query 33861 TCGCACTTCTGGGTCCTGGCCTAATGTGCCGAGGATGATTACTTTATTTACGCCGCGAGT 33920 || | ||| || || || || || | |||| | ||||||||||||||||| | | Sbjct 55727 ACGGATTTCAGGATCTTGCCCCAAGTTACCGATAAGAATTACTTTATTTACGCCTCTGCT 55786 Query 33921 TGCCATTTA 33929 |||||||| Sbjct 55787 GGCCATTTA 55795 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144969850981424