Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_031940.1 Length=77375 Score E Sequences producing significant alignments: (Bits) Value seq1596 187 1e-42 >seq1596 Length=248270 Score = 187 bits (206), Expect = 1e-42 Identities = 337/491 (69%), Gaps = 4/491 (1%) Strand=Plus/Minus Query 69990 CACGAACTGAAAGAAGTCGGCGATCAGTGGCGGACACCAGACCTGCTTTTT--TGGGGCA 70047 || |||||||||||| | || ||||| ||| | |||||| |||||| | ||||| | Sbjct 107786 CATGAACTGAAAGAAATTGGTGATCAATGGTGCACACCAAG--TGCTTTGTATTGGGGAA 107729 Query 70048 TTAATGCGATGTTCGGTCCCCTAACGCTGGATCTCTTTGCTGACGACGATAACGCTAAGT 70107 ||| | || | ||| | | |||||| | ||| |||||| | || |||| Sbjct 107728 TTAGCTCAATATACGGGATTTTCAAACTGGATTTGTTTACTGACGGAAAAAATAGTAAGG 107669 Query 70108 GCCCTGTGTGGTACACCGCCGATGATAACGCGTTGGTACAAGATTGGGCGGAAATGCTGG 70167 ||| | || || || || ||||| || || || || ||| | | ||||| Sbjct 107668 CTCCTTATTTCTATACTGCAGAGGATAATGCACTGACGCAGGACTGGTCCACTAAGCTGG 107609 Query 70168 AATCAATCGGCGGTGCCGCATTCGGTAATCCACCCTATAGCCGCTCTCAGTACCACGAGA 70227 | | ||||| || || || || ||||| || ||| ||| | || ||||| | Sbjct 107608 CAGAGGTTGGCGGCGCTGCTTTTGGAAATCCGCCATATTCCCGTAGTTCCTATCACGAAA 107549 Query 70228 AGCAGGCGATCACCGGCATGACCCACATCATGGATCACACAATGGAGATGCGTGAAAAGG 70287 | ||| | ||||| ||| | ||||| ||| |||| ||||| ||||||| || || | Sbjct 107548 AACAGCCCATCACTGGCGTTGGTCACATTATGAATCATGCAATGAAGATGCGAGAGAAAG 107489 Query 70288 GCGGTCGCTATGTGTTCCTCGTTAAAGCGGCAACAAGTGAAACGTGGTGGCCGGAAGACG 70347 | |||||||||||||| | | ||||| ||||| || ||||| |||||||| || | | Sbjct 107488 GTGGTCGCTATGTGTTTTTACTAAAAGCTGCAACTAGCGAAACATGGTGGCCTGAGCATG 107429 Query 70348 CCGATCACATCATGTTTATCCGCGGTCGTATTGGCTTCGATCTCCCCGTGTGGTTTGTCC 70407 | ||||| | ||||| || ||||||||||| |||||| ||||| | |||||| || Sbjct 107428 CTGATCATGTTTGCTTTATTCGTGGTCGTATTGGTTTCGATGTCCCCCTATGGTTTAACC 107369 Query 70408 CTGCCGACGATAAGCAGAAGACCACTGGTGCATTCTTTGCTGGCGCCATTGCAATCTTCG 70467 | | |||||| |||||| | | |||||||||||||| || || || | | |||| Sbjct 107368 CAGTTAGCGATAAACAGAAGCCAAGCGGTGCATTCTTTGCCGGTGCAATAGTCGTTTTCG 107309 Query 70468 ATAAGTCATGG 70478 |||| ||||| Sbjct 107308 ATAAAACATGG 107298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 247470033413848