Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20sericata_20[genbank_20GCA_5F001014835.1_202015-05-28] 92,075 sequences; 319,935,455 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq9860 410 1e-109 seq74052 398 6e-106 seq89290 98.7 8e-16 >seq9860 Length=13996 Score = 410 bits (454), Expect = 1e-109 Identities = 1050/1593 (66%), Gaps = 29/1593 (2%) Strand=Plus/Plus Query 65240 CCACGATCTGCAGCCATGTCAATGATACGACGTCCCG-ATATCTCCCAGACGGTCTTGTA 65298 |||||||| || ||||| | ||| | | | | || | |||||||| || |||||||| Sbjct 9153 CCACGATCGGCGGCCATTTGTATGGTG-GTCTTAACGGAAATCTCCCAAACTGTCTTGTA 9211 Query 65299 CAGGCGACGTACCTCAATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAAT 65358 || ||||| | | ||||| || || ||| | || | || || ||| | ||| Sbjct 9212 TAGATCACGTATATGTTTGGGAATTTCTTCTATGGCTTGTATGGAGCCGCGATTGGAAAT 9271 Query 65359 AATGCGATTACGCATCGACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTG 65418 ||| ||| ||| || ||| ||| | | ||| | | || || || ||| || Sbjct 9272 AATTTTATTTTTCATTTCATCATCCCATAAATCAAGTTCGGTTAAATCTTTAAGCAAATG 9331 Query 65419 ACGATTGATGACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGAT 65478 | |||||| || | ||| || || |||| ||||| | || || ||||| ||| Sbjct 9332 ATGATTGACAACATTGAATTCTCCCGACAAAACACGTCTAGTGTAAATATTGGAGGTGTA 9391 Query 65479 GGGTTCAAAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGC 65538 ||||||||||||||| |||||||||||||||| || || || || || |||||||| || Sbjct 9392 CGGTTCAAAGGATTCATTGTTGCCTAGAATTTGTGCGGTCGAAGCTGTGGGCATGGGGGC 9451 Query 65539 GACCAACAATGAGTTTCGCAATCC--GTTCATTTCAATGTTGTGACGCAATTCGTCCCAG 65596 | | ||| || || || | || ||| || || || | ||| || |||| Sbjct 9452 TAATAGCAAAGAATTGCGTACACCATGTTGCTTG--ATTTTCTCCTTCAACTCTGACCAG 9509 Query 65597 TTCCACATCGGTTTATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATA 65656 ||||||| || | | | | | | |||||||| | ||| || | || || Sbjct 9510 TTCCACAA--GTCTGTGGGTGTTTTATTC----CACATATCGTATTGTAGTATACCCTTA 9563 Query 65657 CTGGCCGGTGAACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTG 65716 || | || | ||| | || | || || || || | | ||| | || ||| || Sbjct 9564 CTTACTGGACAGCCGGGATAAGTTTCATATGTGCCATCTTTTTCGGCCAATTCACAACTA 9623 Query 65717 GTCTCGAGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCA 65776 | || | |||| || ||||||| || |||||||| || |||| | | |||| Sbjct 9624 GCTTCCAATGCGCCATAATAAATAGTTTCGAAAATCTGTTGATTTAACAAAAACGCCTTT 9683 Query 65777 TCGCTCTCGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATA 65836 || ||||| || || || ||| | | ||||| ||||| | ||| ||||| || || Sbjct 9684 TCACTCTCATAGGGGTAACGCATTAAAATCAAAGTATCGGCAAAACCCTGAACACCTATG 9743 Query 65837 CCGATGGGACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATA 65896 || || ||||||||||||| |||||| || |||||||| | || || || || || Sbjct 9744 CCAATAGGACGATGACGCATATTGGATTTCCTAGCCTCAGGCAAGGGATAATAGTTAATG 9803 Query 65897 TCGATAATGCGATTCAAATTGCGTGTCACCACATGCACGATACGTCGCAATTGTTCGAAA 65956 ||||| || || | ||| || | || | || | | ||||| || ||| Sbjct 9804 TCGATGATTTTGTTGAGATTCTTGGTAATGACTTTAGTGACATTTTTCAATTTTTTAAAA 9863 Query 65957 TCAAAA-TGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGA 66015 ||||| | ||| || || ||| |||||| | |||||| | || Sbjct 9864 TCAAAGGTCTTT-------TCTGGTGTG---------ACAAACATATTAAGGGCTATGGA 9907 Query 66016 TGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAG 66075 || | || || || |||||||| ||||| || | ||| || ||||| || ||||||| Sbjct 9908 GGCCAAATTACAAACGGCTATCTCATCAGGGGCAGAATATTCTACAATCTCTGTGCACAA 9967 Query 66076 ATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTT 66135 || ||||| |||||||| | ||| || || ||||| ||||| ||||| ||||| || Sbjct 9968 GTTGCTGCACTTAATGGTGCCAATATTTTGCTGGTTACTTTTGCGGTTGCAGGCATCTTT 10027 Query 66136 GTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGC 66195 |||| ||| || ||||| ||||| || ||||||| ||||| || || ||||||||| Sbjct 10028 ATACAACATATAGGGAGTACCGGTTTCTACTTGGGCTTCAATTATAGCAAACCAAAGAGC 10087 Query 66196 GCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTC 66255 | ||||| || || || ||| |||||| ||| || | || | | ||| Sbjct 10088 CTGAGCCTTGACAGTGCGATTGGCCTTACCTTCTTTTTCATACTTGGTATACAATTCTTC 10147 Query 66256 GAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCA 66315 ||| |||||||| || || ||||| ||||| ||||| |||||||| || ||||| Sbjct 10148 GAATTCCTCACCCCAAACATCCTGCAGACCGGGACATTTGTGAGGACACATTAGGGACCA 10207 Query 66316 ATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAG 66375 ||||||| | ||| ||||| |||||| | || |||||||| | || ||||| || Sbjct 10208 GTCACCATTTTCTTCCACACGTTTCATAAACAAGTCGGGTATCCACAAAGCATAGAAAAG 10267 Query 66376 ATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGAT 66435 ||| | |||| ||||| || ||||| ||||| || || | || ||||| || Sbjct 10268 ATCTCTGGCTCTGTGCTCTTCCTTGCCGGTGTTTTTCTTTAAATCCAAAAATTCAAAAAT 10327 Query 66436 GTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTG 66495 || | |||||| || |||| || || || || | || |||||||| ||||| || Sbjct 10328 ATCTGAATGCCAAGGCTCCAAATAAATAGCAAAGGCACCAGGGCGTTTGCCACCACCCTG 10387 Query 66496 GTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTT 66555 || || || || || |||||||| || || | | ||| ||||| || || || || | Sbjct 10388 ATCAACATAACGGGCCACATTGTTAAACACCCTAAGCATTGGTACCAGACCATTTGAGGT 10447 Query 66556 GCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAAT 66615 ||| || |||||||| |||| | || || | || ||| ||||| | ||||| Sbjct 10448 GCCGTTAGTGCCGTCAATGGAAGTGCCCTTAGCTCTAATGCAGTGCACATTTATGCCAAT 10507 Query 66616 ACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAAT 66675 |||||| || | || || || ||||| | |||||| | ||| || || ||||| Sbjct 10508 ACCACCCGCTGATTTGGAAATCATGGCACATTGTTCCACTGACTTGAAAATACCCTCAAT 10567 Query 66676 GGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGC 66735 || || || ||||||| | | ||||||| | || ||| | || ||||| Sbjct 10568 AGAATCGGCCACCATGGTCAACAAGAAGCATGACGACAACTGCGGTCTATTGGTAGCGGC 10627 Query 66736 CGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTC 66795 || || | || |||| ||| || ||||| ||| | ||||| |||| || || || Sbjct 10628 CGCAAACAATGTAGGTGAAGCATGAGTAAAATAACGCTCAGACAACAAATTATAAGTTTC 10687 Query 66796 GATGACAGCATCAATGTTTTCGCCATGAATCCC 66828 || | | |||||| | || ||||| || || Sbjct 10688 AATAGCCGAATCAATATCATCTCCATGTATACC 10720 Score = 123 bits (136), Expect = 2e-23 Identities = 130/171 (76%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 ||| || || || || || ||||| || || | ||| || || | ||| ||||||||||| Sbjct 8925 ATCTACGGTAAATTGAATAGCATTGGCTGCTGGCTTTGTTCTCAAATAATACATGCCGGT 8984 Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTC 65196 ||| | ||| | ||| ||||||||||| || || | ||||| | ||||| ||||| Sbjct 8985 CTTTAAGCCTGATTTCCAGGCATAGAAATGTATGGAGGTCAATTTGCCGTAATTTGGCTC 9044 Query 65197 GGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATC 65247 ||||||||| ||||| ||||| ||||| ||||| ||| || |||||||| Sbjct 9045 GGCCACATGTATATTGAACGATTGACTTTGATCTATGAAAGCGCCACGATC 9095 >seq74052 Length=11856 Score = 398 bits (440), Expect = 6e-106 Identities = 527/726 (73%), Gaps = 9/726 (1%) Strand=Plus/Minus Query 61106 AGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACT 61165 |||| |||||||| || ||||| || || || || ||| | |||||||||| |||| Sbjct 6152 AGGCCGAAGCTTCTTTTTGGACTGTAGAAGAAGTGGATCTTTCCAAAGACAATTCCGACT 6093 Query 61166 GGGAGCGTTT-ATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCC 61224 |||| | | | ||| | ||||| ||||||||| |||||| | || |||||||| Sbjct 6092 GGGAAAGACTCACCGA-CAATGAACGTCATTTCATTTCACATGTTCTAGCTTTCTTTGCT 6034 Query 61225 GCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTG 61284 ||||| || || || |||||||| ||| | | ||||| ||| | || || || ||||| Sbjct 6033 GCTTCCGATGGCATTGTCAATGAAAATCTTGTTGAACGCTTCTCCCAAGAAGTACAAGTT 5974 Query 61285 TCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATG 61344 | ||||| || |||||||| |||||||| ||||||||||| ||||| ||||| || ||| Sbjct 5973 ACAGAGGCACGCTGTTTCTATGGCTTCCAAATTGCCATGGAAAATGTACACTCTGAAATG 5914 Query 61345 TACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAAT 61404 || ||| |||| || |||| || || | ||| || | | | ||||| | || ||| Sbjct 5913 TATAGTATTCTAATTGATAGTTATATTAAGGATCGCGAGCAGCGTGATTATCTCTTTAAT 5854 Query 61405 GCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACC 61464 ||||| || || || ||||| || ||||| || || |||||||| | |||||| || Sbjct 5853 GCCATTGAAACTATGCCGGCTGTTAAGCGTAAGGCTGATTGGGCTATGGCTTGGATTTCC 5794 Query 61465 AGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTT 61524 | | |||||| ||||||||||| | | || ||||| | || |||||| | || Sbjct 5793 TCGAAATCGGCTAATTTTGGTGAACGTATTATTGCTTTTGCTGCTGTGGAGGGTATTTTC 5734 Query 61525 TTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTG 61584 |||||||| |||||| | ||||| ||| | ||||||||||| |||||||| ||||| Sbjct 5733 TTCAGTGGCAGTTTTGCCTCCATCTTCTGGCTAAAGAAACGTGGTCTTATGCCTGGTCTT 5674 Query 61585 ACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTTTTG 61644 || ||| |||||| ||||| ||||| || ||||| | |||||||||||||| || || Sbjct 5673 ACATTCTCCAATGAATTGATTTCACGTGATGAGGGTTTACATTGTGATTTTGCGGTATTA 5614 Query 61645 CTATTCAAACGCTATCTGGTGAATCGTCC--GTCGGAGGAGCGTGTGGGTGAGATTGTTC 61702 | || |||| || |||| | ||||| |||| |||| | | ||| ||| | Sbjct 5613 ATGTTTAAAC---ATTTGGTACAACGTCCCAGTCG--GGAGAGAATTATTGAAATTATCA 5559 Query 61703 GTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCATCG 61762 || ||||| | || ||||| ||||| || || || |||||||||||| | || | Sbjct 5558 CCGAAGCGGTGAAAATTGAACAAGAATTCCTTACAGATGCTTTGCCCGTCAATTTGATAG 5499 Query 61763 GCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTCG 61822 ||||||||||| | | ||||| | || || |||||||| ||||| ||| || | || | Sbjct 5498 GCATGAATTGTAAATTGATGTCAGAATACATAGAATTTGTGGCCGATCGTTTGCTAGTGG 5439 Query 61823 ATTTGG 61828 | |||| Sbjct 5438 AATTGG 5433 >seq89290 Length=1024 Score = 98.7 bits (108), Expect = 8e-16 Identities = 180/265 (68%), Gaps = 19/265 (7%) Strand=Plus/Minus Query 38122 TTTCTGGACATCGGTATTCGAGACACCGGTCGCAGCATAACGTACACCATACTGACATGC 38181 ||| || |||||||| || | ||| || || || ||||||||||| || ||||| ||||| Sbjct 259 TTTTTGCACATCGGTGTTTGTGACTCCTGTGGCCGCATAACGTACCCCGTACTGGCATGC 200 Query 38182 CTTGTACAGGGTTGAGCTGACGAGGAAGCCAAATATCTTTTCGCCGACACTCTCGTAACA 38241 |||| ||||| | ||| | || || || ||||| | || || Sbjct 199 -----------------TGACTAGGAAACTAAACACTTTCTCACCAGCACTCGCATAGCA 157 Query 38242 TTTTTGTCCATCGAACTTTAGCTGGAAATCATCGCAATAATACTTGTTCACCTGGAAGCG 38301 | | || || ||||| ||| | |||||||| || || || ||||| || | |||||| Sbjct 156 CTCGCGCCCGTCAAACTTGAGCCGAAAATCATCACAGTAGTATTTGTTGACGTTGAAGCG 97 Query 38302 AAAAGATTCATTGCCTTCGGTAT-CGCGATACGGTTGATTATCTTCAGGAGAGAAATCTT 38360 |||||| || || |||||| ||| || || | ||||| || || | || || | | Sbjct 96 AAAAGACTCGTTACCTTCGATATCCGTGA-AGGGTTGGTTGTCCGCCTCTGAAAAGTTTG 38 Query 38361 CACGATCGAAAAAGTTCCCACTGTC 38385 || | ||||||||| || ||||| Sbjct 37 TGCGCTGGAAAAAGTTTCCGCTGTC 13 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397121863478000