Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lucilia_20sericata_20[genbank_20GCA_5F001014835.1_202015-05-28]
92,075 sequences; 319,935,455 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq9860 410 1e-109
seq74052 398 6e-106
seq89290 98.7 8e-16
>seq9860
Length=13996
Score = 410 bits (454), Expect = 1e-109
Identities = 1050/1593 (66%), Gaps = 29/1593 (2%)
Strand=Plus/Plus
Query 65240 CCACGATCTGCAGCCATGTCAATGATACGACGTCCCG-ATATCTCCCAGACGGTCTTGTA 65298
|||||||| || ||||| | ||| | | | | || | |||||||| || ||||||||
Sbjct 9153 CCACGATCGGCGGCCATTTGTATGGTG-GTCTTAACGGAAATCTCCCAAACTGTCTTGTA 9211
Query 65299 CAGGCGACGTACCTCAATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAAT 65358
|| ||||| | | ||||| || || ||| | || | || || ||| | |||
Sbjct 9212 TAGATCACGTATATGTTTGGGAATTTCTTCTATGGCTTGTATGGAGCCGCGATTGGAAAT 9271
Query 65359 AATGCGATTACGCATCGACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTG 65418
||| ||| ||| || ||| ||| | | ||| | | || || || ||| ||
Sbjct 9272 AATTTTATTTTTCATTTCATCATCCCATAAATCAAGTTCGGTTAAATCTTTAAGCAAATG 9331
Query 65419 ACGATTGATGACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGAT 65478
| |||||| || | ||| || || |||| ||||| | || || ||||| |||
Sbjct 9332 ATGATTGACAACATTGAATTCTCCCGACAAAACACGTCTAGTGTAAATATTGGAGGTGTA 9391
Query 65479 GGGTTCAAAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGC 65538
||||||||||||||| |||||||||||||||| || || || || || |||||||| ||
Sbjct 9392 CGGTTCAAAGGATTCATTGTTGCCTAGAATTTGTGCGGTCGAAGCTGTGGGCATGGGGGC 9451
Query 65539 GACCAACAATGAGTTTCGCAATCC--GTTCATTTCAATGTTGTGACGCAATTCGTCCCAG 65596
| | ||| || || || | || ||| || || || | ||| || ||||
Sbjct 9452 TAATAGCAAAGAATTGCGTACACCATGTTGCTTG--ATTTTCTCCTTCAACTCTGACCAG 9509
Query 65597 TTCCACATCGGTTTATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATA 65656
||||||| || | | | | | | |||||||| | ||| || | || ||
Sbjct 9510 TTCCACAA--GTCTGTGGGTGTTTTATTC----CACATATCGTATTGTAGTATACCCTTA 9563
Query 65657 CTGGCCGGTGAACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTG 65716
|| | || | ||| | || | || || || || | | ||| | || ||| ||
Sbjct 9564 CTTACTGGACAGCCGGGATAAGTTTCATATGTGCCATCTTTTTCGGCCAATTCACAACTA 9623
Query 65717 GTCTCGAGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCA 65776
| || | |||| || ||||||| || |||||||| || |||| | | ||||
Sbjct 9624 GCTTCCAATGCGCCATAATAAATAGTTTCGAAAATCTGTTGATTTAACAAAAACGCCTTT 9683
Query 65777 TCGCTCTCGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATA 65836
|| ||||| || || || ||| | | ||||| ||||| | ||| ||||| || ||
Sbjct 9684 TCACTCTCATAGGGGTAACGCATTAAAATCAAAGTATCGGCAAAACCCTGAACACCTATG 9743
Query 65837 CCGATGGGACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATA 65896
|| || ||||||||||||| |||||| || |||||||| | || || || || ||
Sbjct 9744 CCAATAGGACGATGACGCATATTGGATTTCCTAGCCTCAGGCAAGGGATAATAGTTAATG 9803
Query 65897 TCGATAATGCGATTCAAATTGCGTGTCACCACATGCACGATACGTCGCAATTGTTCGAAA 65956
||||| || || | ||| || | || | || | | ||||| || |||
Sbjct 9804 TCGATGATTTTGTTGAGATTCTTGGTAATGACTTTAGTGACATTTTTCAATTTTTTAAAA 9863
Query 65957 TCAAAA-TGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGA 66015
||||| | ||| || || ||| |||||| | |||||| | ||
Sbjct 9864 TCAAAGGTCTTT-------TCTGGTGTG---------ACAAACATATTAAGGGCTATGGA 9907
Query 66016 TGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAG 66075
|| | || || || |||||||| ||||| || | ||| || ||||| || |||||||
Sbjct 9908 GGCCAAATTACAAACGGCTATCTCATCAGGGGCAGAATATTCTACAATCTCTGTGCACAA 9967
Query 66076 ATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTT 66135
|| ||||| |||||||| | ||| || || ||||| ||||| ||||| ||||| ||
Sbjct 9968 GTTGCTGCACTTAATGGTGCCAATATTTTGCTGGTTACTTTTGCGGTTGCAGGCATCTTT 10027
Query 66136 GTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGC 66195
|||| ||| || ||||| ||||| || ||||||| ||||| || || |||||||||
Sbjct 10028 ATACAACATATAGGGAGTACCGGTTTCTACTTGGGCTTCAATTATAGCAAACCAAAGAGC 10087
Query 66196 GCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTC 66255
| ||||| || || || ||| |||||| ||| || | || | | |||
Sbjct 10088 CTGAGCCTTGACAGTGCGATTGGCCTTACCTTCTTTTTCATACTTGGTATACAATTCTTC 10147
Query 66256 GAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCA 66315
||| |||||||| || || ||||| ||||| ||||| |||||||| || |||||
Sbjct 10148 GAATTCCTCACCCCAAACATCCTGCAGACCGGGACATTTGTGAGGACACATTAGGGACCA 10207
Query 66316 ATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAG 66375
||||||| | ||| ||||| |||||| | || |||||||| | || ||||| ||
Sbjct 10208 GTCACCATTTTCTTCCACACGTTTCATAAACAAGTCGGGTATCCACAAAGCATAGAAAAG 10267
Query 66376 ATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGAT 66435
||| | |||| ||||| || ||||| ||||| || || | || ||||| ||
Sbjct 10268 ATCTCTGGCTCTGTGCTCTTCCTTGCCGGTGTTTTTCTTTAAATCCAAAAATTCAAAAAT 10327
Query 66436 GTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTG 66495
|| | |||||| || |||| || || || || | || |||||||| ||||| ||
Sbjct 10328 ATCTGAATGCCAAGGCTCCAAATAAATAGCAAAGGCACCAGGGCGTTTGCCACCACCCTG 10387
Query 66496 GTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTT 66555
|| || || || || |||||||| || || | | ||| ||||| || || || || |
Sbjct 10388 ATCAACATAACGGGCCACATTGTTAAACACCCTAAGCATTGGTACCAGACCATTTGAGGT 10447
Query 66556 GCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAAT 66615
||| || |||||||| |||| | || || | || ||| ||||| | |||||
Sbjct 10448 GCCGTTAGTGCCGTCAATGGAAGTGCCCTTAGCTCTAATGCAGTGCACATTTATGCCAAT 10507
Query 66616 ACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAAT 66675
|||||| || | || || || ||||| | |||||| | ||| || || |||||
Sbjct 10508 ACCACCCGCTGATTTGGAAATCATGGCACATTGTTCCACTGACTTGAAAATACCCTCAAT 10567
Query 66676 GGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGC 66735
|| || || ||||||| | | ||||||| | || ||| | || |||||
Sbjct 10568 AGAATCGGCCACCATGGTCAACAAGAAGCATGACGACAACTGCGGTCTATTGGTAGCGGC 10627
Query 66736 CGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTC 66795
|| || | || |||| ||| || ||||| ||| | ||||| |||| || || ||
Sbjct 10628 CGCAAACAATGTAGGTGAAGCATGAGTAAAATAACGCTCAGACAACAAATTATAAGTTTC 10687
Query 66796 GATGACAGCATCAATGTTTTCGCCATGAATCCC 66828
|| | | |||||| | || ||||| || ||
Sbjct 10688 AATAGCCGAATCAATATCATCTCCATGTATACC 10720
Score = 123 bits (136), Expect = 2e-23
Identities = 130/171 (76%), Gaps = 0/171 (0%)
Strand=Plus/Plus
Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136
||| || || || || || ||||| || || | ||| || || | ||| |||||||||||
Sbjct 8925 ATCTACGGTAAATTGAATAGCATTGGCTGCTGGCTTTGTTCTCAAATAATACATGCCGGT 8984
Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTC 65196
||| | ||| | ||| ||||||||||| || || | ||||| | ||||| |||||
Sbjct 8985 CTTTAAGCCTGATTTCCAGGCATAGAAATGTATGGAGGTCAATTTGCCGTAATTTGGCTC 9044
Query 65197 GGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATC 65247
||||||||| ||||| ||||| ||||| ||||| ||| || ||||||||
Sbjct 9045 GGCCACATGTATATTGAACGATTGACTTTGATCTATGAAAGCGCCACGATC 9095
>seq74052
Length=11856
Score = 398 bits (440), Expect = 6e-106
Identities = 527/726 (73%), Gaps = 9/726 (1%)
Strand=Plus/Minus
Query 61106 AGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACT 61165
|||| |||||||| || ||||| || || || || ||| | |||||||||| ||||
Sbjct 6152 AGGCCGAAGCTTCTTTTTGGACTGTAGAAGAAGTGGATCTTTCCAAAGACAATTCCGACT 6093
Query 61166 GGGAGCGTTT-ATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCC 61224
|||| | | | ||| | ||||| ||||||||| |||||| | || ||||||||
Sbjct 6092 GGGAAAGACTCACCGA-CAATGAACGTCATTTCATTTCACATGTTCTAGCTTTCTTTGCT 6034
Query 61225 GCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTG 61284
||||| || || || |||||||| ||| | | ||||| ||| | || || || |||||
Sbjct 6033 GCTTCCGATGGCATTGTCAATGAAAATCTTGTTGAACGCTTCTCCCAAGAAGTACAAGTT 5974
Query 61285 TCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATG 61344
| ||||| || |||||||| |||||||| ||||||||||| ||||| ||||| || |||
Sbjct 5973 ACAGAGGCACGCTGTTTCTATGGCTTCCAAATTGCCATGGAAAATGTACACTCTGAAATG 5914
Query 61345 TACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAAT 61404
|| ||| |||| || |||| || || | ||| || | | | ||||| | || |||
Sbjct 5913 TATAGTATTCTAATTGATAGTTATATTAAGGATCGCGAGCAGCGTGATTATCTCTTTAAT 5854
Query 61405 GCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACC 61464
||||| || || || ||||| || ||||| || || |||||||| | |||||| ||
Sbjct 5853 GCCATTGAAACTATGCCGGCTGTTAAGCGTAAGGCTGATTGGGCTATGGCTTGGATTTCC 5794
Query 61465 AGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTT 61524
| | |||||| ||||||||||| | | || ||||| | || |||||| | ||
Sbjct 5793 TCGAAATCGGCTAATTTTGGTGAACGTATTATTGCTTTTGCTGCTGTGGAGGGTATTTTC 5734
Query 61525 TTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTG 61584
|||||||| |||||| | ||||| ||| | ||||||||||| |||||||| |||||
Sbjct 5733 TTCAGTGGCAGTTTTGCCTCCATCTTCTGGCTAAAGAAACGTGGTCTTATGCCTGGTCTT 5674
Query 61585 ACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTTTTG 61644
|| ||| |||||| ||||| ||||| || ||||| | |||||||||||||| || ||
Sbjct 5673 ACATTCTCCAATGAATTGATTTCACGTGATGAGGGTTTACATTGTGATTTTGCGGTATTA 5614
Query 61645 CTATTCAAACGCTATCTGGTGAATCGTCC--GTCGGAGGAGCGTGTGGGTGAGATTGTTC 61702
| || |||| || |||| | ||||| |||| |||| | | ||| ||| |
Sbjct 5613 ATGTTTAAAC---ATTTGGTACAACGTCCCAGTCG--GGAGAGAATTATTGAAATTATCA 5559
Query 61703 GTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCATCG 61762
|| ||||| | || ||||| ||||| || || || |||||||||||| | || |
Sbjct 5558 CCGAAGCGGTGAAAATTGAACAAGAATTCCTTACAGATGCTTTGCCCGTCAATTTGATAG 5499
Query 61763 GCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTCG 61822
||||||||||| | | ||||| | || || |||||||| ||||| ||| || | || |
Sbjct 5498 GCATGAATTGTAAATTGATGTCAGAATACATAGAATTTGTGGCCGATCGTTTGCTAGTGG 5439
Query 61823 ATTTGG 61828
| ||||
Sbjct 5438 AATTGG 5433
>seq89290
Length=1024
Score = 98.7 bits (108), Expect = 8e-16
Identities = 180/265 (68%), Gaps = 19/265 (7%)
Strand=Plus/Minus
Query 38122 TTTCTGGACATCGGTATTCGAGACACCGGTCGCAGCATAACGTACACCATACTGACATGC 38181
||| || |||||||| || | ||| || || || ||||||||||| || ||||| |||||
Sbjct 259 TTTTTGCACATCGGTGTTTGTGACTCCTGTGGCCGCATAACGTACCCCGTACTGGCATGC 200
Query 38182 CTTGTACAGGGTTGAGCTGACGAGGAAGCCAAATATCTTTTCGCCGACACTCTCGTAACA 38241
|||| ||||| | ||| | || || || ||||| | || ||
Sbjct 199 -----------------TGACTAGGAAACTAAACACTTTCTCACCAGCACTCGCATAGCA 157
Query 38242 TTTTTGTCCATCGAACTTTAGCTGGAAATCATCGCAATAATACTTGTTCACCTGGAAGCG 38301
| | || || ||||| ||| | |||||||| || || || ||||| || | ||||||
Sbjct 156 CTCGCGCCCGTCAAACTTGAGCCGAAAATCATCACAGTAGTATTTGTTGACGTTGAAGCG 97
Query 38302 AAAAGATTCATTGCCTTCGGTAT-CGCGATACGGTTGATTATCTTCAGGAGAGAAATCTT 38360
|||||| || || |||||| ||| || || | ||||| || || | || || | |
Sbjct 96 AAAAGACTCGTTACCTTCGATATCCGTGA-AGGGTTGGTTGTCCGCCTCTGAAAAGTTTG 38
Query 38361 CACGATCGAAAAAGTTCCCACTGTC 38385
|| | ||||||||| || |||||
Sbjct 37 TGCGCTGGAAAAAGTTTCCGCTGTC 13
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397121863478000
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