Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lutzomyia_20longipalpis_20[genbank_20GCA_5F000265325.1_202012-06-11] 11,532 sequences; 154,229,266 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq685 82.4 5e-14 seq609 82.4 5e-14 seq299 82.4 5e-14 >seq685 Length=75719 Score = 82.4 bits (90), Expect = 5e-14 Identities = 67/76 (88%), Gaps = 4/76 (5%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| | ||| ||| | |||||| ||||||||||| |||||||||||||||||||| Sbjct 1182 CTCACTAAACAATT-CAT-CAGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 1238 Query 109 TAATACAACGCAAGCT 124 |||| ||| ||||||| Sbjct 1239 TAAT-CAATGCAAGCT 1253 Score = 82.4 bits (90), Expect = 5e-14 Identities = 67/76 (88%), Gaps = 4/76 (5%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| | ||| ||| | |||||| ||||||||||| |||||||||||||||||||| Sbjct 15325 CTCACTAAACAATT-CAT-CAGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 15269 Query 109 TAATACAACGCAAGCT 124 |||| ||| ||||||| Sbjct 15268 TAAT-CAATGCAAGCT 15254 >seq609 Length=78921 Score = 82.4 bits (90), Expect = 5e-14 Identities = 67/76 (88%), Gaps = 4/76 (5%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| | ||| ||| | |||||| ||||||||||| |||||||||||||||||||| Sbjct 74868 CTCACTAAACAATT-CAT-CAGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 74924 Query 109 TAATACAACGCAAGCT 124 |||| ||| ||||||| Sbjct 74925 TAAT-CAATGCAAGCT 74939 >seq299 Length=148496 Score = 82.4 bits (90), Expect = 5e-14 Identities = 67/76 (88%), Gaps = 4/76 (5%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| | ||| ||| | |||||| ||||||||||| |||||||||||||||||||| Sbjct 148353 CTCACTAAACAATT-CAT-CAGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 148409 Query 109 TAATACAACGCAAGCT 124 |||| ||| ||||||| Sbjct 148410 TAAT-CAATGCAAGCT 148424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300767479760