Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lutzomyia_20longipalpis_20[genbank_20GCA_5F000265325.1_202012-06-11]
11,532 sequences; 154,229,266 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq685 158 2e-36
seq609 154 3e-35
>seq685
Length=75719
Score = 158 bits (174), Expect = 2e-36
Identities = 173/224 (77%), Gaps = 6/224 (3%)
Strand=Plus/Plus
Query 106 AGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTAC 165
|| ||||| |||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct 15067 AGATTGAG-CAATAACAGGTCTGTGATGCCCTTAGATGTCCTGGGCTGCACGCGCGCTAC 15125
Query 166 ACTGACAGAGCCAACGAGTTCATCACCTTGG-CCGGAAGGTCTGGGTAATCTTGTTAAAC 224
| ||| || ||| | ||| | ||| ||| ||| |||| ||||||| | | | || |
Sbjct 15126 AATGAAAGTATCAATGTGTT--TTACCCTGGACCGAGAGGTATGGGTAAACAT-TGAACC 15182
Query 225 TCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAA 284
|| || || | ||||| | | | || || | || | | | ||| ||||| || |||||
Sbjct 15183 ACTTTCTTGGTTGGGATTGTGGACTGTAACTGTT-CACATGAACCCGGAATTCCCAGTAA 15241
Query 285 GCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
| | | ||||| ||| || ||||||||||||||||||||||||
Sbjct 15242 GTGTGAGTCATAAGCTTGCATTGATTACGTCCCTGCCCTTTGTA 15285
Score = 147 bits (162), Expect = 4e-33
Identities = 170/223 (76%), Gaps = 6/223 (3%)
Strand=Plus/Minus
Query 106 AGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTAC 165
|| ||||| |||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct 1438 AGATTGAG-CAATAACAGGTCTGTGATGCCCTTAGATGTCCTGGGCTGCACGCGCGCTAC 1380
Query 166 ACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACT 225
| ||| || ||| | ||| | ||| | ||| |||| ||||||| | | | || |
Sbjct 1379 AATGAAAGTATCAATGTGTT-TTATCCTGGACCGAGAGGTATGGGTAAACAT-TGAACCA 1322
Query 226 CTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAG 285
|| || || | ||||| | | | || || | | | | | ||| ||||| || ||||||
Sbjct 1321 CTTTCTTGGTTGGGATTGTGGACTGTAACTGT--CACATGAACCCGGAAT-CCCAGTAAG 1265
Query 286 CGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
| | ||||| ||| || ||||||||||||||||||||||||
Sbjct 1264 TGTGAGTCATAAGCTTGCATTGATTACGTCCCTGCCCTTTGTA 1222
>seq609
Length=78921
Score = 154 bits (170), Expect = 3e-35
Identities = 171/223 (77%), Gaps = 4/223 (2%)
Strand=Plus/Minus
Query 106 AGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTAC 165
|| ||||| |||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct 75126 AGATTGAG-CAATAACAGGTCTGTGATGCCCTTAGATGTCCTGGGCAGCACGCGCGCTAC 75068
Query 166 ACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACT 225
| ||| || ||| | ||| | ||||| ||| |||| ||||||| | | | || |
Sbjct 75067 AATGAAAGTATCAATGTGTT-TTATCCTTGACCGAGAGGTATGGGTAAACAT-TGAACCA 75010
Query 226 CTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAG 285
|| || || | ||||| | | | || || | | | | | ||| ||||| || ||||||
Sbjct 75009 CTTTCTTGGTTGGGATTGTGGACTGTAACT-GTCCACATGAACCCGGAATTCCCAGTAAG 74951
Query 286 CGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
| | ||||| ||| || ||||||||||||||||||||||||
Sbjct 74950 TGTGAGTCATAAGCTTGCATTGATTACGTCCCTGCCCTTTGTA 74908
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947090768896
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |