Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Maconellicoccus_20hirsutus_20[genbank_20GCA_5F900064465.1_202016-03- 26] 12,889 sequences; 163,044,544 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq10226 197 2e-48 >seq10226 Length=12356 Score = 197 bits (218), Expect = 2e-48 Identities = 181/223 (81%), Gaps = 8/223 (4%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||| | Sbjct 4556 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCGCGCTTACTGGGAATT-C 4499 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | | ||||||||||| | ||||| | ||||| | | |||| | || Sbjct 4498 CTCGTTCACGGGGAACAATTGCAAGCCCCGATCCCTAGCACGAAGGAGGTTCAGCGGGTT 4439 Query 120 ACCCGGA----CCTGTCGGCCAAGGTGATAG-ACTCGTTGAATACATCAGTGTAGCGCGC 174 |||||| ||| |||||| || ||| || || ||| | | |||||||||||||| Sbjct 4438 ACCCGGTAAAGCCTCTCGGCCCGGGAAATATTACACGCTGATTCCTTCAGTGTAGCGCGC 4379 Query 175 GTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 |||||||||||||||||||||||||||||||||||||||| || Sbjct 4378 GTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATCGC 4336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751906103635