Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Maconellicoccus_20hirsutus_20[genbank_20GCA_5F900064465.1_202016-03- 26] 12,889 sequences; 163,044,544 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq10226 134 6e-29 >seq10226 Length=12356 Score = 134 bits (148), Expect = 6e-29 Identities = 101/119 (85%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 565 GTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGG 624 ||||| |||||||||||||||||||||||| | ||| ||||| ||| |||||| ||| Sbjct 7238 GTTGGTACCCGAAAGATGGTGAACTATGCCCGGCCAGGATGAAGTCAGGGGAAACCCTGA 7297 Query 625 TGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||||| ||||||| ||||| ||||||||||||||||| | ||||||||||||||| Sbjct 7298 TGGAGGTCCGCAGCGATTCTGACGTGCAAATCGATCGTCTGAGCTGGGTATAGGGGCGA 7356 Score = 127 bits (140), Expect = 9e-27 Identities = 116/144 (81%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||| || |||||| |||| ||| |||||| | | ||||| ||||||| Sbjct 6466 GAGTCGGGTTGCTTGAGAGTGCAGCCCTAAGCGGGTGGTAAACTCCATCTAAGGCTAAAT 6525 Query 100 ATTGGCCA-GAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGA 158 | | ||| ||||||||||||| ||||||| |||| ||||| ||||||| |||||| | Sbjct 6526 AC-GACCACGAGACCGATAGCGGACAAGTACCGTGAGGGAAAGTTGAAAAGAACTTTGAA 6584 Query 159 AAGAGAGTTAAAAAGCACGTGAAA 182 |||||||| || || |||||||| Sbjct 6585 GAGAGAGTTCAACAGTACGTGAAA 6608 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079723530950