Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Maconellicoccus_20hirsutus_20[genbank_20GCA_5F900064465.1_202016-03- 26] 12,889 sequences; 163,044,544 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq10226 425 2e-116 >seq10226 Length=12356 Score = 425 bits (470), Expect = 2e-116 Identities = 276/302 (91%), Gaps = 1/302 (0%) Strand=Plus/Minus Query 233 ACGGCTCCCACTTATTCTACACCTCT-CAAGTCATTTCACAAAGTCGGACTAGAGTCAAG 291 ||| ||||||||||| ||||||||| || ||| |||| | | |||| |||||||| Sbjct 9613 ACGTCTCCCACTTATGCTACACCTCGGCATGTCTCCGAACAATGCCAGACTGGAGTCAAG 9554 Query 292 CTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTC 351 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 9553 CTCAACAGGGTCTTCTTTCCCCGCTGATTTTTCCAAGCCCGTTCCCTTGGCTGTGGTTTC 9494 Query 352 GCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATT 411 |||| | ||||||||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct 9493 GCTAAAAAGTAGATAGGGACAGAGAGAATCTCGTTAATCCATTCATGCGCGTCACTAATT 9434 Query 412 AGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCG 471 ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct 9433 AGATGACGAGGCATTTGGCTACCTTAAAAGAGTCATAGTTACTCCTGCCGTTTACCCGCG 9374 Query 472 CTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAA 531 |||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||| Sbjct 9373 CTTGCTTGAATTTCTTCACGTTGACATTCAGAGCACTGGGCAGAAATCACATTGTGTCAA 9314 Query 532 CA 533 || Sbjct 9313 CA 9312 Score = 109 bits (120), Expect = 2e-21 Identities = 90/110 (82%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||||||||| ||| |||| || ||| |||| |||||||||||||||||||| Sbjct 10045 CTTTTGCTCTACGCGAGGTTTCCGTCCTCGCTGAGCTGGCCTTAGGACACCTGCGTTATT 9986 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATC 116 ||| |||||||| ||||||||| ||||||||||||||| | |||| || Sbjct 9985 CTTTGACAGATGTACCGCCCCAGTCAAACTCCCCACCTGGCGGTGTCCTC 9936 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1634989239072