Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Maconellicoccus_20hirsutus_20[genbank_20GCA_5F900064465.1_202016-03- 26] 12,889 sequences; 163,044,544 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq10226 293 7e-77 >seq10226 Length=12356 Score = 293 bits (324), Expect = 7e-77 Identities = 237/283 (84%), Gaps = 4/283 (1%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 ||||||||||| ||||| | || |||| ||| || ||||| ||||| | ||||||||| Sbjct 2915 GTACTCATTCCGATTACGGGGCCTCAAATGAGTCCCGTATCGTTATTTTTCGTCACTACC 2856 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||| | |||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2855 TCCCCGAGCTGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 2796 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||| ||| Sbjct 2795 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTTACCACCACGGT 2736 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| | | |||||| |||| |||||||| |||||| ||||||| || | ||||||| Sbjct 2735 AGGCGTCGAACCTACCGTCGACAGTTGATAAGGCAGACATTTGAAAGATACGTCGCCGGT 2676 Query 240 TCAAGG-CCATGCGATTCGTT--AAGTTATTATGAATCACCAA 279 | ||| || |||||| | | |||||||| || ||||||| Sbjct 2675 ACGAGGACCGTGCGATCAGCTCGAAGTTATTCAGAGTCACCAA 2633 Score = 196 bits (216), Expect = 1e-47 Identities = 144/164 (88%), Gaps = 4/164 (2%) Strand=Plus/Minus Query 344 GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTA--GTAAGGTACTATCAAATAA 401 |||||||||||||||||||||||||| |||||||| ||| || ||||| ||| || | Sbjct 2500 GCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACGTG-GGTACGATCTAAGGA 2442 Query 402 ACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTA-TAGATTGCTTATACTTAGA 460 || ||||||||||||||||||| ||||| ||||||| ||| |||| |||| ||| ||| Sbjct 2441 ACCATAACTGATTTAATGAGCCTTTCGCGGTTTCACCGTACTAGACGGCTTGCACTGAGA 2382 Query 461 CATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||||||||||||||||||| Sbjct 2381 CATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 2338 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510205324544