Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocentrus_20cingulum_20[genbank_20GCA_5F002156465.1_202017-05-22] 12,056 sequences; 127,916,415 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq11054 215 8e-54 seq2536 149 9e-34 seq1954 122 1e-25 >seq11054 Length=12756 Score = 215 bits (238), Expect = 8e-54 Identities = 187/226 (83%), Gaps = 7/226 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||| | Sbjct 2419 GTACAAAGGGCAGGGACGTAATCAACGCGAGCTT-ATGACTCGCGCTTACTGGGAATT-C 2476 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | | || |||||||| | ||||| | ||||| | | |||| | || Sbjct 2477 CTCGTTCATGGGGAATAATTGCAAGCCCCAATCCCTAGCACGAAGGAGGTTCAGCGGGTT 2536 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||||| ||| ||||||| || | || |||||| | | ||||||||||||||||||| Sbjct 2537 ACCCGGGCCTTTCGGCCAGGGAAA---ACACGTTGATTCCTTCAGTGTAGCGCGCGTGCG 2593 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 ||||||||||||||||||||||||||||||||||||| ||||| || Sbjct 2594 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT 2638 Score = 93.3 bits (102), Expect = 6e-17 Identities = 56/58 (97%), Gaps = 1/58 (2%) Strand=Plus/Plus Query 168 AGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || Sbjct 3021 AGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT 3077 >seq2536 Length=343 Score = 149 bits (164), Expect = 9e-34 Identities = 146/184 (79%), Gaps = 6/184 (3%) Strand=Plus/Minus Query 43 GCGCTTACTAGGAATTTCCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACG 102 ||||||||| |||||| ||||||| | | || |||||||| | ||||| | |||| Sbjct 343 GCGCTTACTGGGAATT-CCTCGTTCATGGGGAATAATTGCAAGCCCCAATCCCTAGCACG 285 Query 103 ATGAAATTTCAAAGA-TTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACAT 161 | | | |||| | |||||||| ||| ||||||| || | || ||||| | | | Sbjct 284 AAGGAGGTTCAGCGGGTTACCCGGGCCTTTCGGCCAGGGAAA---ACATGTTGATTCCTT 228 Query 162 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 221 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 227 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG-CTCA 169 Query 222 AACT 225 | || Sbjct 168 ATCT 165 >seq1954 Length=426 Score = 122 bits (134), Expect = 1e-25 Identities = 131/169 (78%), Gaps = 6/169 (4%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||||||||| |||||||||||||||| |||| ||| Sbjct 164 GTACAAAGGGCAGGGACGTAATCAACGCGAGCTT-ATGACTCGCGCTTACTGGGAA-TTC 107 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||| | | || |||||||| | ||||| | ||||| | | |||| | || Sbjct 106 CTCGTATATGGGGAATAATTGCAAGCCCCAATCCCTAGCACGAAGGAGGTTCAGCGGGTT 47 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTA 168 |||||| ||| ||||||| || | || |||||| | | |||||||| Sbjct 46 ACCCGGGCCTTTCGGCCAGGG---AAAACACGTTGATTCCTTCAGTGTA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751912172040