Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocentrus_20cingulum_20[genbank_20GCA_5F002156465.1_202017-05-22] 12,056 sequences; 127,916,415 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq11650 140 1e-30 seq5680 140 1e-30 seq5358 140 1e-30 seq570 140 1e-30 seq10480 136 2e-29 seq8320 136 2e-29 seq3001 127 9e-27 >seq11650 Length=537 Score = 140 bits (154), Expect = 1e-30 Identities = 109/130 (84%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 ||||| || |||||||||||||||||||||||||||||||| ||| ||||| ||| Sbjct 530 AGAGCGTACACGTTGGGACCCGAAAGATGGTGAACTATGCCTGGTCAGGATGAAGTCAGG 471 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673 |||||| ||| |||||| || |||| ||||| ||||||||||||||||| | ||||| Sbjct 470 GGAAACCCTGATGGAGGTCCGTAGCGATTCTGACGTGCAAATCGATCGTCGGAACTGGGT 411 Query 674 ATAGGGGCGA 683 |||||||||| Sbjct 410 ATAGGGGCGA 401 >seq5680 Length=5538 Score = 140 bits (154), Expect = 1e-30 Identities = 109/130 (84%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 ||||| || |||||||||||||||||||||||||||||||| ||| ||||| ||| Sbjct 3015 AGAGCGTACACGTTGGGACCCGAAAGATGGTGAACTATGCCTGGTCAGGATGAAGTCAGG 2956 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673 |||||| ||| |||||| || |||| ||||| ||||||||||||||||| | ||||| Sbjct 2955 GGAAACCCTGATGGAGGTCCGTAGCGATTCTGACGTGCAAATCGATCGTCGGAACTGGGT 2896 Query 674 ATAGGGGCGA 683 |||||||||| Sbjct 2895 ATAGGGGCGA 2886 Score = 118 bits (130), Expect = 4e-24 Identities = 92/110 (84%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 ||||| || |||||||||| ||||||||||||||||||||| ||| ||||| ||| Sbjct 3680 AGAGCGTACACGTTGGGACCCAAAAGATGGTGAACTATGCCTGGTCAGGATGAAGTCAGG 3621 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTC 663 |||||| ||| |||||| || |||| ||||| ||||||||||||||||| Sbjct 3620 GGAAACCCTGATGGAGGTCCGTAGCGATTCTGACGTGCAAATCGATCGTC 3571 Score = 100 bits (110), Expect = 1e-18 Identities = 82/100 (82%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 584 TGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTC 643 ||||||||||||| ||| ||||| ||| |||||| ||| |||||| || |||| ||| Sbjct 3560 TGAACTATGCCTGGTCAGGATGAAGTCAGGGGAAACCCTGATGGAGGTCCGTAGCGATTC 3501 Query 644 TGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 || ||||||||||||||||| | |||||||||| |||| Sbjct 3500 TGACGTGCAAATCGATCGTCGGAACTGGGTATAGGAGCGA 3461 >seq5358 Length=636 Score = 140 bits (154), Expect = 1e-30 Identities = 109/130 (84%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 ||||| || |||||||||||||||||||||||||||||||| ||| ||||| ||| Sbjct 629 AGAGCGTACACGTTGGGACCCGAAAGATGGTGAACTATGCCTGGTCAGGATGAAGTCAGG 570 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673 |||||| ||| |||||| || |||| ||||| ||||||||||||||||| | ||||| Sbjct 569 GGAAACCCTGATGGAGGTCCGTAGCGATTCTGACGTGCAAATCGATCGTCGGAACTGGGT 510 Query 674 ATAGGGGCGA 683 |||||||||| Sbjct 509 ATAGGGGCGA 500 >seq570 Length=1535 Score = 140 bits (154), Expect = 1e-30 Identities = 109/130 (84%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 ||||| || |||||||||||||||||||||||||||||||| ||| ||||| ||| Sbjct 665 AGAGCGTACACGTTGGGACCCGAAAGATGGTGAACTATGCCTGGTCAGGATGAAGTCAGG 724 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673 |||||| ||| |||||| || |||| ||||| ||||||||||||||||| | ||||| Sbjct 725 GGAAACCCTGATGGAGGTCCGTAGCGATTCTGACGTGCAAATCGATCGTCGGAACTGGGT 784 Query 674 ATAGGGGCGA 683 |||||||||| Sbjct 785 ATAGGGGCGA 794 >seq10480 Length=1712 Score = 136 bits (150), Expect = 2e-29 Identities = 116/143 (81%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||| || ||||||||||| |||| |||||| | | ||||| ||||||| Sbjct 1048 GAGTCGGGTTGCTTGAGAGTGCAGCTCTAAGTGGGTGGTAAACTCCATCTAAGGCTAAAT 1107 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 || | ||||||||||||| ||||||| |||| ||||| ||||||| |||||| | Sbjct 1108 ATAACCACGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGTTGAAAAGAACTTTGAAG 1167 Query 160 AGAGAGTTAAAAAGCACGTGAAA 182 |||||||| || || |||||||| Sbjct 1168 AGAGAGTTCAAGAGTACGTGAAA 1190 Score = 82.4 bits (90), Expect = 3e-13 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 108 GAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTT 167 ||||||||||||| ||||||| |||| ||||| ||||||| |||||| | |||||||| Sbjct 5 GAGACCGATAGCGAACAAGTACCGTGAGGGAAAGTTGAAAAGAACTTTGAAGAGAGAGTT 64 Query 168 AAAAAGCACGTGAAA 182 || || |||||||| Sbjct 65 CAAGAGTACGTGAAA 79 >seq8320 Length=319 Score = 136 bits (150), Expect = 2e-29 Identities = 116/143 (81%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||| || ||||||||||| |||| |||||| | | ||||| ||||||| Sbjct 265 GAGTCGGGTTGCTTGAGAGTGCAGCTCTAAGTGGGTGGTAAACTCCATCTAAGGCTAAAT 206 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 || | ||||||||||||| ||||||| |||| ||||| ||||||| |||||| | Sbjct 205 ATAACCACGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGTTGAAAAGAACTTTGAAG 146 Query 160 AGAGAGTTAAAAAGCACGTGAAA 182 |||||||| || || |||||||| Sbjct 145 AGAGAGTTCAAGAGTACGTGAAA 123 >seq3001 Length=24367 Score = 127 bits (140), Expect = 9e-27 Identities = 106/130 (82%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 ||||| || |||||||||||||||||||||||||||||||| ||| ||||| || Sbjct 11245 AGAGCGTACACGTTGGGACCCGAAAGATGGTGAACTATGCCTGGTCAGGATGAAGTTAGG 11186 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673 |||||| ||| |||||| | |||| ||||| ||||||||| ||||||| | ||||| Sbjct 11185 GGAAACCCTGATGGAGGTCCATAGCGATTCTGACGTGCAAATTGATCGTCGGAACTGGGT 11126 Query 674 ATAGGGGCGA 683 |||||||||| Sbjct 11125 ATAGGGGCGA 11116 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079741398800