Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocentrus_20cingulum_20[genbank_20GCA_5F002156465.1_202017-05-22] 12,056 sequences; 127,916,415 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq11054 188 1e-45 seq11098 152 8e-35 seq2536 118 2e-24 >seq11054 Length=12756 Score = 188 bits (208), Expect = 1e-45 Identities = 112/117 (96%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 |||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||| Sbjct 7332 CTATTTAGCAGGCTAAAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCA 7391 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 7392 ACTAAGAACGGCCATGCACCACCACCCACCGAATCAAGAAAGAGCTATCAATCTGTC 7448 Score = 179 bits (198), Expect = 6e-43 Identities = 110/117 (94%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 |||||||||||| || |||||||||||||||||||||||||||||||||| |||||| | Sbjct 3286 CTATTTAGCAGGCTAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACAA 3345 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 3346 ACTAAGAACGGCCATGCACCACCACCCACCGAATCAAGAAAGAGCTATCAATCTGTC 3402 Score = 178 bits (196), Expect = 2e-42 Identities = 109/116 (94%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||||||| |||| || |||||||||||||||||||||||||||||||||| |||||||| Sbjct 2764 CTATTTAACAGGCTAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCA 2823 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGT 257 |||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 2824 ACTAAGAACGGCCATGCACCACCACCCACCGAATCAAGAAAGAGCTATCAATCTGT 2879 Score = 163 bits (180), Expect = 5e-38 Identities = 101/108 (94%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 151 AGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAAC 210 ||| || |||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 2880 AGGCTAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCAACTAAGAAC 2939 Query 211 GGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||| |||| ||||||||||||||||||||||||||| Sbjct 2940 GGCCATGCACCACCCCCCACCGAATCAAGAAAGAGCTATCAATCTGTC 2987 Score = 118 bits (130), Expect = 2e-24 Identities = 90/104 (87%), Gaps = 2/104 (2%) Strand=Plus/Plus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2571 TCCTTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 2630 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115 ||||| | || |||| ||| || |||||||||||||| Sbjct 2631 -CTCAATC-TCGTGCGGCTAGAAACCGCCTGTCCCTCTAAGAAG 2672 Score = 102 bits (112), Expect = 1e-19 Identities = 80/93 (86%), Gaps = 2/93 (2%) Strand=Plus/Plus Query 23 AGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTC 82 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | || Sbjct 3021 AGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATC-TC 3078 Query 83 CATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115 |||| ||| || |||||||||||||| Sbjct 3079 GTGCGGCTAGAAACCGCCTGTCCCTCTAAGAAG 3111 >seq11098 Length=347 Score = 152 bits (168), Expect = 8e-35 Identities = 95/102 (93%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 157 AGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCAT 216 |||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| Sbjct 17 AGGTCTCGTTCGTTATCGCAATTAAGCAGACAAATCACTCCACCAACTAAGAACGGCCAT 76 Query 217 GCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||| ||| | |||||||||||||| |||||||||| Sbjct 77 GCACCACCATCCAAAAGATCAAGAAAGAGCTCTCAATCTGTC 118 >seq2536 Length=343 Score = 118 bits (130), Expect = 2e-24 Identities = 90/104 (87%), Gaps = 2/104 (2%) Strand=Plus/Minus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 232 TCCTTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 173 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115 ||||| | || |||| ||| || |||||||||||||| Sbjct 172 -CTCAATC-TCGTGCGGCTAGAAACCGCCTGTCCCTCTAAGAAG 131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796706939736