Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocentrus_20cingulum_20[genbank_20GCA_5F002156465.1_202017-05-22] 12,056 sequences; 127,916,415 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq11401 286 4e-75 seq11054 122 9e-26 seq450 122 9e-26 seq3342 113 5e-23 seq1912 104 2e-20 seq4582 78.8 1e-12 >seq11401 Length=360 Score = 286 bits (316), Expect = 4e-75 Identities = 177/188 (94%), Gaps = 1/188 (1%) Strand=Plus/Minus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct 317 GGAACCAGGACTTTTACTGTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATA 258 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 257 CATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCG- 199 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||||||||| |||| ||||||||||||| ||||||||||| ||||| ||||||||||| Sbjct 198 CCGTAATGATTAATAGGGATAGTCGGGGGCGTCAGTATTCAGCTGTCAGAGGTGAAATTC 139 Query 181 TTGGATTT 188 |||||||| Sbjct 138 TTGGATTT 131 >seq11054 Length=12756 Score = 122 bits (134), Expect = 9e-26 Identities = 140/183 (77%), Gaps = 8/183 (4%) Strand=Plus/Minus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC---CTTTGCTCGAATAC-ATTA 65 || ||||||||||| ||||||||| | | ||||||||| || || |||||| | Sbjct 8108 ACGTTTACTTTGAACAAATTAGAGTGCTTAAAGCAGGCTATTTTCGCCTGAATACTGTGT 8049 Query 66 CCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCC--CG 123 ||||||||||||||||||||| | |||||||||||||| ||||| | ||| | || | Sbjct 8048 GCATGGAATAATAGAATAGGACCT-CGGTTCTATTTTGTTGGTTT-TCGGAACTCCGAGG 7991 Query 124 TAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTG 183 ||||||| |||| ||| || ||||| | ||||| || | |||||||||||||| Sbjct 7990 TAATGATTAATAGGGACAGATGGGGGCATTCGTATTGCGACGTTAGAGGTGAAATTCTTG 7931 Query 184 GAT 186 ||| Sbjct 7930 GAT 7928 >seq450 Length=614 Score = 122 bits (134), Expect = 9e-26 Identities = 140/183 (77%), Gaps = 8/183 (4%) Strand=Plus/Minus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC---CTTTGCTCGAATAC-ATTA 65 || ||||||||||| ||||||||| | | ||||||||| || || |||||| | Sbjct 323 ACGTTTACTTTGAACAAATTAGAGTGCTTAAAGCAGGCTATTTTCGCCTGAATACTGTGT 264 Query 66 CCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCC--CG 123 ||||||||||||||||||||| | |||||||||||||| ||||| | ||| | || | Sbjct 263 GCATGGAATAATAGAATAGGACCT-CGGTTCTATTTTGTTGGTTT-TCGGAACTCCGAGG 206 Query 124 TAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTG 183 ||||||| |||| ||| || ||||| | ||||| || | |||||||||||||| Sbjct 205 TAATGATTAATAGGGACAGATGGGGGCATTCGTATTGCGACGTTAGAGGTGAAATTCTTG 146 Query 184 GAT 186 ||| Sbjct 145 GAT 143 >seq3342 Length=326 Score = 113 bits (124), Expect = 5e-23 Identities = 134/176 (76%), Gaps = 8/176 (5%) Strand=Plus/Minus Query 17 CTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTT---GCTCGAATACATTAC-CATGGA 72 ||||||| ||||||||| | | ||||||||| || || |||||| | |||||| Sbjct 326 CTTTGAACAAATTAGAGTGCTTAAAGCAGGCTATTTTCGCCTGAATACTGTGTGCATGGA 267 Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCC--GTAATGAT 130 ||||||||||||||| | |||||||||||||| ||||| | ||| | || |||||||| Sbjct 266 ATAATAGAATAGGACCT-CGGTTCTATTTTGTTGGTTT-TCGGAACTCCGAGGTAATGAT 209 Query 131 AAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGAT 186 |||| ||| || ||||| | ||||| || | ||||||||||||||||| Sbjct 208 TAATAGGGACAGATGGGGGCATTCGTATTGCGACGTTAGAGGTGAAATTCTTGGAT 153 >seq1912 Length=254 Score = 104 bits (114), Expect = 2e-20 Identities = 114/146 (78%), Gaps = 8/146 (5%) Strand=Plus/Plus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC---CTTTGCTCGAATAC-ATTA 65 || ||||||||||| ||||||||| | | ||||||||| || || |||||| | Sbjct 110 ACGTTTACTTTGAACAAATTAGAGTGCTTAAAGCAGGCTATTTTCGCCGGAATACTGTGT 169 Query 66 CCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCC--CG 123 ||||||||||||||||||||| | |||||||||||||| ||||| | ||| | || | Sbjct 170 GCATGGAATAATAGAATAGGACCT-CGGTTCTATTTTGTTGGTTT-TCGGAACTCCGAGG 227 Query 124 TAATGATAAATACGGATAGTCGGGGG 149 ||||||| |||| ||| || ||||| Sbjct 228 TAATGATTAATAGGGACAGATGGGGG 253 >seq4582 Length=383 Score = 78.8 bits (86), Expect = 1e-12 Identities = 77/96 (80%), Gaps = 5/96 (5%) Strand=Plus/Minus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC---CTTTGCTCGAATAC-ATTA 65 || ||||||||||| ||||||||| | | ||||||||| || || |||||| | Sbjct 95 ACGTTTACTTTGAACAAATTAGAGTGCTTAAAGCAGGCTATTTTCGCCTGAATACTGTGT 36 Query 66 CCATGGAATAATAGAATAGGACGTGCGGTTCTATTT 101 ||||||||||||||||||||| | ||||||||||| Sbjct 35 GCATGGAATAATAGAATAGGACCT-CGGTTCTATTT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511940202240