Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocentrus_20cingulum_20[genbank_20GCA_5F002156465.1_202017-05-22] 12,056 sequences; 127,916,415 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq11054 237 3e-60 seq2536 174 3e-41 seq1954 131 3e-28 >seq11054 Length=12756 Score = 237 bits (262), Expect = 3e-60 Identities = 210/258 (81%), Gaps = 6/258 (2%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| ||| | | ||||| || | ||||| |||||||||||||||| Sbjct 2672 CTTCTTAGAGGGACAGGCGGTTTCTAGCCGCACGA-GATTGAG-CAATAACAGGTCTGTG 2615 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||||||||||||||||||||||||||||| || ||||| ||| Sbjct 2614 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGAAGGAATCAACGTGTTTT--- 2558 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 || |||||| |||| | |||||| | | || ||| ||||||| ||||| | | ||| Sbjct 2557 CCCTGGCCGAAAGGCCCGGGTAACCCGCTGAACCTCCTTCGTGCTAGGGATTGGGGCTTG 2498 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 |||||||| | | | |||||||||| || |||||||||| ||||| ||| |||||||||| Sbjct 2497 CAATTATTCCCCATGAACGAGGAATTCCCAGTAAGCGCGAGTCATAAGCTCGCGTTGATT 2438 Query 311 ACGTCCCTGCCCTTTGTA 328 |||||||||||||||||| Sbjct 2437 ACGTCCCTGCCCTTTGTA 2420 Score = 104 bits (114), Expect = 4e-20 Identities = 81/93 (87%), Gaps = 3/93 (3%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| ||| | | ||||| || | ||||| |||||||||||||||| Sbjct 3111 CTTCTTAGAGGGACAGGCGGTTTCTAGCCGCACGA-GATTGAG-CAATAACAGGTCTGTG 3054 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCT 163 ||||||||||||||||||||||||||||||||| Sbjct 3053 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCT 3021 >seq2536 Length=343 Score = 174 bits (192), Expect = 3e-41 Identities = 172/218 (79%), Gaps = 6/218 (3%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| ||| | | ||||| || | ||||| |||||||||||||||| Sbjct 131 CTTCTTAGAGGGACAGGCGGTTTCTAGCCGCACGA-GATTGAG-CAATAACAGGTCTGTG 188 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||||||||||||||||||||||||||||| || |||| || | Sbjct 189 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGAAGGAATCAACATGT---TTT 245 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 || |||||| |||| | |||||| | | || ||| ||||||| ||||| | | ||| Sbjct 246 CCCTGGCCGAAAGGCCCGGGTAACCCGCTGAACCTCCTTCGTGCTAGGGATTGGGGCTTG 305 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGC 288 |||||||| | | | |||||||||| || ||||||||| Sbjct 306 CAATTATTCCCCATGAACGAGGAATTCCCAGTAAGCGC 343 >seq1954 Length=426 Score = 131 bits (144), Expect = 3e-28 Identities = 129/166 (78%), Gaps = 3/166 (2%) Strand=Plus/Plus Query 163 TACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAA 222 |||||||| || ||||| ||| || |||||| |||| | |||||| | | || Sbjct 1 TACACTGAAGGAATCAACGTGTTTT---CCCTGGCCGAAAGGCCCGGGTAACCCGCTGAA 57 Query 223 ACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGT 282 ||| ||||||| ||||| | | ||||||||||| | | | ||||||||| || ||| Sbjct 58 CCTCCTTCGTGCTAGGGATTGGGGCTTGCAATTATTCCCCATATACGAGGAATTCCCAGT 117 Query 283 AAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 ||||||| ||||| ||| |||||||||||||||||||||||||||| Sbjct 118 AAGCGCGAGTCATAAGCTCGCGTTGATTACGTCCCTGCCCTTTGTA 163 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947085805568